C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell division cycle 5-like (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024727 Cdc5l-201 ENSMUSG00000023932 10090 - 17:45391892-45433707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024727
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024727 5.154±1.71 2.458±0.85 8.818±1.36 17.857±5.71 4.899±2.20 4.206±0.90 4.482±0.25 5.575±0.47 6.641±5.35 4.834±0.67 10.986±0.53 9.422±8.83 20.583±8.94 8.162±7.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0002 VISTA 17:45025360-45628753

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 ISS mRNA splicing, via spliceosome
GO:0000974 ISS Prp19 complex
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005662 ISS DNA replication factor A complex
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008380 IEA RNA splicing
GO:0016020 IEA membrane
GO:0016607 IEA nuclear speck
GO:0019904 IEA protein domain specific binding
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome
GO:0071987 ISS WD40-repeat domain binding
GO:0072422 ISS signal transduction involved in DNA damage checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371477 CDC5L-001 protein_coding Homo_sapiens 0 3345

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