C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: triggering receptor expressed on myeloid cells 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024791 Trem2-001 ENSMUSG00000023992 10090 + 17:48346401-48352273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024791 23.201±14.45 3.410±0.84 2.940±0.56 1.210±0.25 2.803±0.79 1.658±0.44 1.032±0.20 0.210±0.08 1.563±1.50 2.914±0.74 0.138±0.01 8.070±3.04 2.165±1.26 0.669±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008F3 CIL_0008F3_0002 VISTA 17:47757242-48358147

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001530 IDA lipopolysaccharide binding
GO:0004888 ISS transmembrane signaling receptor activity
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005886 IEA plasma membrane
GO:0031663 IC lipopolysaccharide-mediated signaling pathway
GO:0032497 IDA detection of lipopolysaccharide
GO:0032499 IDA detection of peptidoglycan
GO:0042834 IDA peptidoglycan binding
GO:0045087 IC innate immune response
GO:0070392 IDA detection of lipoteichoic acid
GO:0070891 IDA lipoteichoic acid binding
GO:0071223 IDA cellular response to lipoteichoic acid
GO:0071224 IDA cellular response to peptidoglycan

Homologs

No Homologs available.

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