C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cutA divalent cation tolerance homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025027 Cuta-201 ENSMUSG00000024194 10090 - 17:26937973-26939468 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025027 31.041±4.08 65.208±29.17 40.497±3.67 13.448±8.91 43.756±10.58 34.096±4.37 17.258±1.53 34.319±5.18 28.166±5.42 38.900±8.13 15.565±3.59 25.276±10.63 28.997±12.35 8.100±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000915 CIL_000915_0002 VISTA 17:26527896-27128643
CIL_0008HF CIL_0008HF_0002 VISTA 17:26563571-27166666
CIL_000252 CIL_000252_0002 CGP 17:26933127-26939478
CIL_000253 CIL_000253_0002 CGP 17:26937973-26970645

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008104 IEA protein localization
GO:0010038 IEA response to metal ion
GO:0016020 IEA membrane
GO:0019899 IEA enzyme binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374484 CUTA-007 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000374496 CUTA-010 protein_coding Homo_sapiens 0 573
ENST00000374500 CUTA-001 protein_coding Homo_sapiens 0 573
ENST00000435267 CUTA-001 protein_coding Homo_sapiens 0 573
ENST00000440279 CUTA-013 protein_coding Homo_sapiens 0 573
ENST00000440930 CUTA-008 protein_coding Homo_sapiens 0 612
ENST00000461913 CUTA-004 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000462802 CUTA-003 retained_intron Homo_sapiens 0 573
ENST00000464657 CUTA-007 nonsense_mediated_decay Homo_sapiens 0 555
ENST00000465956 CUTA-009 retained_intron Homo_sapiens 0 353
ENST00000467431 CUTA-011 retained_intron Homo_sapiens 0 477
ENST00000468782 CUTA-010 retained_intron Homo_sapiens 0 573
ENST00000479249 CUTA-011 retained_intron Homo_sapiens 0 268
ENST00000480120 CUTA-009 retained_intron Homo_sapiens 0 353
ENST00000480677 CUTA-012 retained_intron Homo_sapiens 0 268
ENST00000482684 CUTA-004 nonsense_mediated_decay Homo_sapiens 0 575
ENST00000487148 CUTA-003 protein_coding Homo_sapiens 0 573
ENST00000488034 CUTA-008 protein_coding Homo_sapiens 0 612
ENST00000494751 CUTA-005 protein_coding Homo_sapiens 0 477
ENST00000607266 CUTA-014 protein_coding Homo_sapiens 0 575
ENST00000611509 CUTA-201 protein_coding Homo_sapiens 0 573

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