C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: StAR-related lipid transfer (START) domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025236 Stard4-001 ENSMUSG00000024378 10090 - 18:33199355-33213862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025236
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025236 2.336±1.11 6.488±2.16 1.381±0.09 2.612±1.01 2.547±0.26 14.052±1.13 1.324±0.10 11.235±0.95 14.761±4.77 8.672±1.35 0.422±0.11 3.897±1.22 6.055±4.71 1.055±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UT CIL_0004UT_0002 CGP 18:32939041-33213862
CIL_0004US CIL_0004US_0002 CGP 18:33199355-33464029

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 TAS mitochondrion
GO:0015485 ISA cholesterol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296632 STARD4-001 protein_coding Homo_sapiens 0 654
ENST00000455172 STARD4-010 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000502322 STARD4-002 protein_coding Homo_sapiens 0 448
ENST00000502931 STARD4-006 processed_transcript Homo_sapiens 0 363
ENST00000505803 STARD4-008 protein_coding Homo_sapiens 0 654
ENST00000509887 STARD4-004 protein_coding Homo_sapiens 6e-36 156
ENST00000510346 STARD4-011 processed_transcript Homo_sapiens 6e-39 165
ENST00000511137 STARD4-005 nonsense_mediated_decay Homo_sapiens 0 363
ENST00000511436 STARD4-012 processed_transcript Homo_sapiens 3e-36 156
ENST00000511569 STARD4-003 processed_transcript Homo_sapiens 0 335

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