C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0004US_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000164211-ENSG00000134986 | CGP | 9606 | 5:111496033-111997464  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000134986  (NREP)neuronal regeneration related protein |
ENST00000257435 (NREP-003)
|
111729296-111757258 | protein_coding | |
|
ENST00000379671 (NREP-001)
|
111728812-111757724 | protein_coding | ||
|
ENST00000395634 (NREP-008)
|
111729984-111976931 | protein_coding | ||
|
ENST00000419114 (NREP-014)
|
111730704-111757555 | protein_coding | ||
|
ENST00000446294 (NREP-005)
|
111729316-111757470 | protein_coding | ||
|
ENST00000447165 (NREP-201)
|
111729303-111756251 | protein_coding | ||
|
ENST00000450761 (NREP-009)
|
111730691-111997464 | protein_coding | ||
|
ENST00000453526 (NREP-018)
|
111730747-111757401 | protein_coding | ||
|
ENST00000455559 (NREP-010)
|
111730806-111758218 | protein_coding | ||
|
ENST00000503429 (NREP-002)
|
111734488-111757194 | retained_intron | ||
|
ENST00000504018 (NREP-022)
|
111730954-111756251 | retained_intron | ||
|
ENST00000505864 (NREP-019)
|
111734984-111757633 | retained_intron | ||
|
ENST00000507032 (NREP-013)
|
111735496-111758042 | protein_coding | ||
|
ENST00000507742 (NREP-016)
|
111730642-111757229 | processed_transcript | ||
|
ENST00000508161 (NREP-011)
|
111731027-111758203 | protein_coding | ||
|
ENST00000508870 (NREP-017)
|
111730868-111757643 | protein_coding | ||
|
ENST00000509025 (NREP-006)
|
111669191-111757194 | protein_coding | ||
|
ENST00000509427 (NREP-015)
|
111730724-111757409 | protein_coding | ||
|
ENST00000509979 (NREP-021)
|
111730658-111758070 | protein_coding | ||
|
ENST00000513100 (NREP-012)
|
111730932-111758094 | protein_coding | ||
|
ENST00000513684 (NREP-023)
|
111755357-111757164 | retained_intron | ||
|
ENST00000514515 (NREP-007)
|
111662621-111757194 | nonsense_mediated_decay | ||
|
ENST00000515855 (NREP-020)
|
111730517-111757194 | protein_coding | ||
|
ENSG00000164211 (STARD4) StAR-related lipid transfer (START) domain containing 4 |
ENST00000296632 (STARD4-001)
|
111496033-111512510 | protein_coding | |
|
ENST00000455172 (STARD4-010)
|
111500988-111512512 | nonsense_mediated_decay | ||
|
ENST00000502322 (STARD4-002)
|
111500147-111512590 | protein_coding | ||
|
ENST00000502931 (STARD4-006)
|
111499585-111512535 | processed_transcript | ||
|
ENST00000505803 (STARD4-008)
|
111499882-111512562 | protein_coding | ||
|
ENST00000508215 (STARD4-009)
|
111506216-111512510 | retained_intron | ||
|
ENST00000509887 (STARD4-004)
|
111500246-111512535 | protein_coding | ||
|
ENST00000510346 (STARD4-011)
|
111500631-111512471 | processed_transcript | ||
|
ENST00000511137 (STARD4-005)
|
111499402-111512535 | nonsense_mediated_decay | ||
|
ENST00000511436 (STARD4-012)
|
111500609-111512535 | processed_transcript | ||
|
ENST00000511569 (STARD4-003)
|
111500464-111512535 | processed_transcript | ||
|
ENST00000512160 (STARD4-007)
|
111496947-111512535 | protein_coding | ||
|
ENSG00000246859 (STARD4-AS1) STARD4 antisense RNA 1 |
ENST00000500779 (STARD4-AS1-002)
|
111512226-111739726 | antisense | |
|
ENST00000513221 (STARD4-AS1-001)
|
111730389-111732181 | antisense | ||
|
ENSG00000249439 (HMGN1P14) high mobility group nucleosome binding domain 1 pseudogene 14 |
ENST00000412459 (HMGN1P14-001)
|
111846050-111846566 | processed_pseudogene | |
|
ENSG00000249619 (HMGN1P13) high mobility group nucleosome binding domain 1 pseudogene 13 |
ENST00000505795 (HMGN1P13-001)
|
111572102-111572239 | processed_pseudogene | |
|
ENSG00000250095 (NREP-AS1) NREP antisense RNA 1 |
ENST00000503242 (NREP-AS1-003)
|
111969452-112017309 | antisense | |
|
ENST00000507222 (NREP-AS1-001)
|
111912508-112017306 | antisense | ||
|
ENST00000508389 (NREP-AS1-002)
|
111940053-111948988 | antisense | ||
|
ENSG00000253057 (RN7SKP57) RNA, 7SK small nuclear pseudogene 57 |
ENST00000517248 (RN7SKP57-201)
|
111719769-111720061 | misc_RNA | |
| CIL_0004US_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000024378-ENSMUSG00000042834 | CGP | 10090 | 18:33199355-33464029 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000024378 (Stard4) StAR-related lipid transfer (START) domain containing 4 |
ENSMUST00000025236 (Stard4-001)
|
33199355-33213862 | protein_coding | |
|
ENSMUST00000118990 (Stard4-004)
|
33203599-33213772 | protein_coding | ||
|
ENSMUST00000119991 (Stard4-003)
|
33203405-33213766 | protein_coding | ||
|
ENSMUST00000141617 (Stard4-002)
|
33204667-33213821 | retained_intron | ||
|
ENSMUSG00000042834 (Nrep) neuronal regeneration related protein |
ENSMUST00000051087 (Nrep-201)
|
33437019-33463634 | protein_coding | |
|
ENSMUST00000168890 (Nrep-202)
|
33437019-33464029 | protein_coding | ||
|
ENSMUST00000171533 (Nrep-203)
|
33437019-33463747 | protein_coding | ||
Expression Patterns
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