C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell death-inducing DNA fragmentation factor, alpha subunit-like effector A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025404 Cidea-201 ENSMUSG00000024526 10090 + 18:67343564-67367794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025404
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025404 61.909±33.37 64.199±9.07 0.816±0.71 87.820±54.25 0.335±0.14 26.710±10.64 29.999±6.09 0.116±0.00 8.780±6.57 0.529±0.21 2.086±0.73 0.952±0.26 2.907±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_00025T CIL_00025T_0003 CGP 18:67343564-67402748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001659 IMP temperature homeostasis
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005740 IDA mitochondrial envelope
GO:0005811 IDA lipid particle
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006629 IMP lipid metabolic process
GO:0006915 IEA apoptotic process
GO:0008219 IDA cell death
GO:0010890 IDA positive regulation of sequestering of triglyceride
GO:0019915 IMP lipid storage
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032720 IEA negative regulation of tumor necrosis factor production
GO:0035634 IEP response to stilbenoid
GO:0042803 IDA protein homodimerization activity
GO:0050710 IEA negative regulation of cytokine secretion
GO:0050995 IMP negative regulation of lipid catabolic process
GO:1900118 IDA negative regulation of execution phase of apoptosis
GO:1902510 IDA regulation of apoptotic DNA fragmentation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320477 CIDEA-002 protein_coding Homo_sapiens 0 590
ENST00000520620 CIDEA-004 processed_transcript Homo_sapiens 0 333
ENST00000521296 CIDEA-001 processed_transcript Homo_sapiens 0 549
ENST00000522713 CIDEA-003 nonsense_mediated_decay Homo_sapiens 0 388

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