C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) assembly chaperone 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025418 Psmg2-201 ENSMUSG00000024537 10090 + 18:67641599-67654162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025418
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025418 11.598±1.53 12.734±1.09 20.494±2.67 14.283±8.98 7.697±1.90 8.094±1.27 12.489±0.95 12.859±0.55 21.574±14.92 7.935±0.91 12.379±0.73 11.603±2.20 24.052±10.10 19.740±5.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_0001BA CIL_0001BA_0002 CGP 18:67641599-67724595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0007094 IDA mitotic spindle assembly checkpoint
GO:0043066 IDA negative regulation of apoptotic process
GO:0043248 ISS proteasome assembly
GO:0051726 IDA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317615 PSMG2-001 protein_coding Homo_sapiens 0 800
ENST00000585331 PSMG2-006 protein_coding Homo_sapiens 0 737
ENST00000586445 PSMG2-007 protein_coding Homo_sapiens 0 584
ENST00000586587 PSMG2-003 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000590217 PSMG2-002 protein_coding Homo_sapiens 0 763

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