C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035987-ENSDARG00000035986 CGP 7955 19:12972195-13014945
GeneTranscriptPositionBiotype
ENSDARG00000035986 (ptpn2b)
protein tyrosine phosphatase, non-receptor type 2, b 		ENSDART00000052239 (ptpn2b-001) 12984913-13014945 protein_coding
ENSDART00000125910 (ptpn2b-002) 13008423-13014884 nonsense_mediated_decay
ENSDARG00000035987 (psmg2)
proteasome (prosome, macropain) assembly chaperone 2 		ENSDART00000052240 (psmg2-001) 12972195-12982247 protein_coding
CIL_0001BA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024537-ENSMUSG00000024539 CGP 10090 18:67641599-67724595
GeneTranscriptPositionBiotype
ENSMUSG00000024537 (Psmg2)
proteasome (prosome, macropain) assembly chaperone 2 		ENSMUST00000025418 (Psmg2-201) 67641599-67654162 protein_coding
ENSMUSG00000024539 (Ptpn2)
protein tyrosine phosphatase, non-receptor type 2 		ENSMUST00000025420 (Ptpn2-001) 67665512-67724588 protein_coding
ENSMUST00000120934 (Ptpn2-003) 67665511-67724573 protein_coding
ENSMUST00000122412 (Ptpn2-002) 67671212-67724595 protein_coding
ENSMUST00000128169 (Ptpn2-004) 67675818-67690224 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BA_0001ENSDARG00000035986ENSDART00000052239ENSDART00000125910ENSDARG00000035987ENSDART00000052240CIL_0001BA_0002ENSMUSG00000024537ENSMUST00000025418ENSMUSG00000024539ENSMUST00000025420ENSMUST00000120934ENSMUST00000122412ENSMUST00000128169
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BA_0001ENSDARG00000035986ENSDART00000052239ENSDARG00000035987ENSDART00000052240CIL_0001BA_0002ENSMUSG00000024537ENSMUST00000025418ENSMUSG00000024539ENSMUST00000025420ENSMUST00000120934ENSMUST00000122412ENSMUST00000128169
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035986 ENSDART00000052239 N/A N/A N/A 5.274±1.76 N/A N/A 7.250±2.00 16.389±2.19 0.789±0.00 N/A 3.726±0.00 N/A N/A N/A
ENSDART00000125910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000035987 ENSDART00000052240 N/A N/A N/A 7.066±3.71 N/A N/A 10.260±7.25 5.286±6.75 5.048±0.00 N/A 7.000±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024537 ENSMUST00000025418 11.598±1.53 12.734±1.09 20.494±2.67 14.283±8.98 7.697±1.90 8.094±1.27 12.489±0.95 12.859±0.55 21.574±14.92 7.935±0.91 12.379±0.73 11.603±2.20 24.052±10.10 19.740±5.77
ENSMUSG00000024539 ENSMUST00000025420 1.624±0.62 1.395±0.55 4.864±0.72 3.689±0.68 1.542±0.21 2.421±0.68 1.288±0.17 1.316±0.52 5.436±4.07 1.910±0.00 2.887±0.59 2.694±2.49 15.753±4.02 2.380±0.40
ENSMUST00000120934 0.668±0.09 1.214±0.00 N/A 1.147±0.00 1.517±0.41 2.412±0.00 N/A 0.982±0.49 1.201±0.31 2.111±0.51 0.497±0.00 2.836±2.62 N/A 1.840±1.00
ENSMUST00000122412 0.750±0.27 0.747±0.26 0.875±0.07 1.845±1.23 0.804±0.23 0.843±0.56 0.466±0.10 0.529±0.07 1.032±0.34 0.936±0.32 0.638±0.15 1.156±0.44 2.276±0.11 1.089±0.11
ENSMUST00000128169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.614±0.06 N/A N/A

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