C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025490 Prrc1-201 ENSMUSG00000024594 10090 + 18:57354733-57392719 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025490
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025490 14.988±1.86 25.663±10.25 15.995±1.66 9.762±5.68 16.164±7.42 24.195±4.75 7.108±0.41 9.186±0.93 8.660±1.41 17.548±2.87 5.514±0.25 24.121±11.46 8.681±4.58 3.383±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000H5 CIL_0000H5_0003 CGP 18:57133090-57392719
CIL_0000HB CIL_0000HB_0003 CGP 18:57354733-57478134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296666 PRRC1-001 protein_coding Homo_sapiens 0 1122
ENST00000442138 PRRC1-002 protein_coding Homo_sapiens 0 874
ENST00000512635 PRRC1-003 protein_coding Homo_sapiens 0 1079

Loading