C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025500 Slc27a6-001 ENSMUSG00000024600 10090 + 18:58556257-58612773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025500 0.564±0.18 0.253±0.14 0.156±0.03 0.089±0.04 0.388±0.11 0.173±0.07 0.038±0.02 0.029±0.01 0.084±0.04 1.382±0.24 0.032±0.02 1.117±0.86 6.025±3.55 2.710±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041M CIL_00041M_0002 CGP 18:58008623-58612773
CIL_0006CX CIL_0006CX_0003 CGP 18:58556257-58679570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 TAS long-chain fatty acid metabolic process
GO:0004467 TAS long-chain fatty acid-CoA ligase activity
GO:0005783 TAS endoplasmic reticulum
GO:0031957 IDA very long-chain fatty acid-CoA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262462 SLC27A6-001 protein_coding Homo_sapiens 0 1447
ENST00000395266 SLC27A6-003 protein_coding Homo_sapiens 0 1447
ENST00000506176 SLC27A6-004 protein_coding Homo_sapiens 0 1447
ENST00000508645 SLC27A6-002 protein_coding Homo_sapiens 0 468

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