C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 27 (fatty acid transporter), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395266 SLC27A6-003 ENSG00000113396 9606 + 5:128965517-129033642 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartOvaryENST00000395266
Transcript ID Adrenal Brain Breast Colon Heart Ovary
ENST00000395266 0.103±0.00 0.508±0.00 0.220±0.00 0.159±0.00 3.366±0.78 1.303±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041L CIL_00041L_0001 CGP 5:128083766-128659185
CIL_00041M CIL_00041M_0001 CGP 5:128257909-129033642
CIL_0006CX CIL_0006CX_0002 CGP 5:128538013-129114028

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000038 TAS very long-chain fatty acid metabolic process
GO:0000166 IEA nucleotide binding
GO:0001676 TAS long-chain fatty acid metabolic process
GO:0003824 IEA catalytic activity
GO:0004467 TAS long-chain fatty acid-CoA ligase activity
GO:0005886 TAS plasma membrane
GO:0008152 IEA metabolic process
GO:0015909 TAS long-chain fatty acid transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025500 Slc27a6-001 protein_coding Mus_musculus 0 1447

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