C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter, L-proline), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025520 Slc6a7-201 ENSMUSG00000052026 10090 - 18:60995381-61014199 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025520 0.295±0.11 0.121±0.10 0.019±0.01 5.599±3.29 0.442±0.27 2.148±1.18 0.296±0.01 0.112±0.05 0.032±0.03 0.336±0.01 0.111±0.06 1.073±0.84 0.087±0.07 2.140±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0002 VISTA 18:60604549-61207221

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0006836 IEA neurotransmitter transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230671 SLC6A7-001 protein_coding Homo_sapiens 0 2597
ENST00000513403 SLC6A7-002 retained_intron Homo_sapiens 0 300
ENST00000524041 SLC6A7-003 protein_coding Homo_sapiens 0 2475

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