C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: riboflavin kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025617 Rfk-001 ENSMUSG00000024712 10090 + 19:17394043-17401349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025617 29.748±6.28 782.054±277.35 23.185±2.24 12.761±6.20 55.736±34.82 367.310±119.32 26.994±3.29 62.904±15.89 32.370±8.40 72.523±22.69 30.501±5.45 95.566±33.95 24.565±20.55 13.344±7.25

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006915 IEA apoptotic process
GO:0008531 ISA riboflavin kinase activity
GO:0009231 IEA riboflavin biosynthetic process
GO:0009398 IEA FMN biosynthetic process
GO:0016310 IEA phosphorylation
GO:0033864 IGI positive regulation of NAD(P)H oxidase activity
GO:0046872 IEA metal ion binding
GO:0072593 IGI reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376736 RFK-001 protein_coding Homo_sapiens 0 617
ENST00000400940 RFKP1-001 transcribed_processed_pseudogene Homo_sapiens 0 403
ENST00000472900 RFK-005 processed_transcript Homo_sapiens 0 335
ENST00000476087 RFK-006 processed_transcript Homo_sapiens 0 496
ENST00000479197 RFK-003 processed_transcript Homo_sapiens 6e-37 159
ENST00000483155 RFK-002 processed_transcript Homo_sapiens 0 496
ENST00000490113 RFK-004 protein_coding Homo_sapiens 0 385
ENST00000491262 RP11-767L7.2-001 processed_pseudogene Homo_sapiens 0 331

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