C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: riboflavin kinase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000376736 RFK-001 ENSG00000135002 9606 - 9:76385517-76394505 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376736 3.830±0.00 4.986±0.00 1.899±0.00 12.726±1.49 2.212±1.72 6.103±1.61 4.050±2.70 6.846±4.66 4.387±1.60 3.765±3.50 0.404±0.00 6.820±4.48 5.525±2.42 8.739±3.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005737 NAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0006771 TAS riboflavin metabolic process
GO:0006915 IMP apoptotic process
GO:0008531 NAS:IEA riboflavin kinase activity
GO:0009231 NAS:IEA riboflavin biosynthetic process
GO:0009398 IEA FMN biosynthetic process
GO:0016310 IEA phosphorylation
GO:0033864 IMP positive regulation of NAD(P)H oxidase activity
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0072593 IEA reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025617 Rfk-001 protein_coding Mus_musculus 0 617
ENSMUST00000136162 Rfk-002 processed_transcript Mus_musculus 0 494
ENSMUST00000146171 Rfk-003 processed_transcript Mus_musculus 0 335

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