C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025663 Tmem2-201 ENSMUSG00000024754 10090 + 19:21778342-21858327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025663
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025663 2.437±0.92 3.390±0.29 1.674±0.34 7.217±4.28 3.890±1.53 3.107±1.00 1.363±0.48 3.446±0.74 2.100±1.22 22.561±4.31 1.377±0.51 3.286±0.62 3.460±0.80 0.293±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000054 CIL_000054_0002 CGP 19:21653309-21858327
CIL_0000J9 CIL_0000J9_0002 CGP 19:21778342-22989884

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007275 IEA multicellular organismal development
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377043 TMEM2-005 protein_coding Homo_sapiens 0 568
ENST00000377044 TMEM2-001 protein_coding Homo_sapiens 0 4318
ENST00000377057 TMEM2-002 retained_intron Homo_sapiens 0 761
ENST00000377066 TMEM2-008 protein_coding Homo_sapiens 0 2916
ENST00000396272 TMEM2-006 protein_coding Homo_sapiens 0 1088
ENST00000474495 TMEM2-003 retained_intron Homo_sapiens 0 584
ENST00000537329 TMEM2-014 retained_intron Homo_sapiens 0 540
ENST00000538669 TMEM2-010 retained_intron Homo_sapiens 0 315
ENST00000542935 TMEM2-009 nonsense_mediated_decay Homo_sapiens 0 2486
ENST00000546219 TMEM2-013 retained_intron Homo_sapiens 0 342

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