C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000J9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061600-ENSDARG00000039181 CGP 7955 5:27410071-27707881
GeneTranscriptPositionBiotype
ENSDARG00000039181 (trpm3)
transient receptor potential cation channel, subfamily M, member 3 		ENSDART00000088033 (trpm3-201) 27596889-27707872 protein_coding
ENSDART00000147188 (trpm3-001) 27596889-27707881 protein_coding
ENSDARG00000061600 (tmem2)
transmembrane protein 2 		ENSDART00000088011 (tmem2-201) 27410071-27456958 protein_coding
ENSDART00000133217 (tmem2-001) 27410071-27458164 protein_coding
ENSDART00000135650 (tmem2-002) 27456422-27456788 processed_transcript
ENSDARG00000092641 (si:dkey-148e22.3)
si:dkey-148e22.3 		ENSDART00000142210 (si:dkey-148e22.3-001) 27608731-27612001 antisense

Danio rerio Ensembl (Zv9)

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CIL_0000J9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024754-ENSMUSG00000052387 CGP 10090 19:21778342-22989884
GeneTranscriptPositionBiotype
ENSMUSG00000024754 (Tmem2)
transmembrane protein 2 		ENSMUST00000025663 (Tmem2-201) 21778342-21858327 protein_coding
ENSMUST00000096194 (Tmem2-202) 21778342-21858327 protein_coding
ENSMUSG00000045104 (Gm5514)
predicted gene 5514 		ENSMUST00000060477 (Gm5514-201) 21938079-21938384 processed_pseudogene
ENSMUSG00000052387 (Trpm3)
transient receptor potential cation channel, subfamily M, member 3 		ENSMUST00000037901 (Trpm3-201) 22448283-22989884 protein_coding
ENSMUST00000074770 (Trpm3-202) 22139119-22989882 protein_coding
ENSMUST00000087576 (Trpm3-203) 22139119-22989882 protein_coding
ENSMUST00000099564 (Trpm3-204) 22692619-22926489 protein_coding
ENSMUST00000099566 (Trpm3-205) 22692619-22772372 protein_coding
ENSMUST00000099569 (Trpm3-206) 22139119-22989882 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000J9_0001ENSDARG00000039181ENSDART00000088033ENSDART00000147188ENSDARG00000061600ENSDART00000088011ENSDART00000133217ENSDART00000135650ENSDARG00000092641ENSDART00000142210CIL_0000J9_0002ENSMUSG00000024754ENSMUST00000025663ENSMUST00000096194ENSMUSG00000045104ENSMUST00000060477ENSMUSG00000052387ENSMUST00000037901ENSMUST00000074770ENSMUST00000087576ENSMUST00000099564ENSMUST00000099566ENSMUST00000099569
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000J9_0001ENSDARG00000039181ENSDART00000088033ENSDART00000147188ENSDARG00000061600ENSDART00000088011ENSDART00000133217ENSDARG00000092641ENSDART00000142210CIL_0000J9_0002ENSMUSG00000024754ENSMUST00000025663ENSMUST00000096194ENSMUSG00000045104ENSMUST00000060477ENSMUSG00000052387ENSMUST00000037901ENSMUST00000074770ENSMUST00000087576ENSMUST00000099564ENSMUST00000099566ENSMUST00000099569
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039181 ENSDART00000088033 N/A N/A N/A 1.787±0.00 N/A N/A 0.019±0.00 N/A 0.015±0.00 N/A 0.391±0.00 N/A N/A N/A
ENSDART00000147188 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000061600 ENSDART00000088011 N/A N/A N/A 0.599±0.00 N/A N/A 1.495±0.92 1.471±0.00 0.142±0.00 N/A N/A N/A N/A N/A
ENSDART00000133217 N/A N/A N/A 0.705±0.08 N/A N/A 9.674±0.00 6.672±3.05 N/A N/A N/A N/A N/A N/A
ENSDART00000135650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092641 ENSDART00000142210 N/A N/A N/A 0.176±0.00 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024754 ENSMUST00000025663 2.437±0.92 3.390±0.29 1.674±0.34 7.217±4.28 3.890±1.53 3.107±1.00 1.363±0.48 3.446±0.74 2.100±1.22 22.561±4.31 1.377±0.51 3.286±0.62 3.460±0.80 0.293±0.07
ENSMUST00000096194 0.524±0.09 0.463±0.02 0.256±0.00 2.699±0.81 0.918±0.20 0.460±0.00 N/A 0.493±0.07 0.647±0.07 N/A 0.757±0.37 0.941±0.33 1.053±0.37 0.082±0.03
ENSMUSG00000045104 ENSMUST00000060477 0.592±0.00 N/A 4.211±4.15 14.435±12.66 N/A N/A 0.693±0.35 0.563±0.34 0.249±0.14 0.270±0.02 0.348±0.00 0.989±0.74 13.749±14.33 1.901±1.69
ENSMUSG00000052387 ENSMUST00000037901 0.050±0.00 0.050±0.02 N/A 0.583±0.00 0.097±0.04 0.086±0.04 N/A N/A 0.008±0.01 0.056±0.00 0.043±0.01 0.199±0.11 0.015±0.00 N/A
ENSMUST00000074770 0.086±0.00 0.045±0.02 0.008±0.00 N/A 0.081±0.02 0.048±0.02 N/A 0.288±0.00 0.009±0.00 N/A 0.065±0.00 0.285±0.01 0.010±0.00 N/A
ENSMUST00000087576 N/A 0.023±0.01 N/A 0.614±0.00 N/A N/A 0.175±0.00 0.317±0.01 0.003±0.00 N/A 0.027±0.00 0.084±0.00 0.002±0.00 N/A
ENSMUST00000099564 N/A N/A 0.015±0.00 N/A 0.104±0.09 0.055±0.02 0.063±0.00 N/A 0.009±0.00 N/A 0.022±0.00 0.348±0.00 0.040±0.00 N/A
ENSMUST00000099566 N/A N/A N/A 1.508±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A 0.013±0.00 0.234±0.00
ENSMUST00000099569 N/A 0.015±0.00 N/A 0.536±0.00 0.070±0.00 N/A N/A 0.134±0.00 0.003±0.00 N/A 0.032±0.00 0.230±0.12 N/A N/A

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