C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA directed), alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025752 Pola2-201 ENSMUSG00000024833 10090 - 19:5940543-5964206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025752 5.714±1.97 3.426±1.04 5.307±2.47 5.215±2.88 7.579±4.74 6.249±3.21 2.213±0.95 2.160±1.11 18.541±17.19 3.527±2.34 2.484±1.42 11.596±6.02 11.058±3.35 6.654±2.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000060 IDA protein import into nucleus, translocation
GO:0003677 IEA DNA binding
GO:0003887 IEA DNA-directed DNA polymerase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005658 IDA alpha DNA polymerase:primase complex
GO:0005737 IEA cytoplasm
GO:0006260 IDA DNA replication
GO:0006270 IBA DNA replication initiation
GO:0046982 IPI protein heterodimerization activity
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265465 POLA2-001 protein_coding Homo_sapiens 0 1520
ENST00000525924 POLA2-008 protein_coding Homo_sapiens 0 641
ENST00000527618 POLA2-004 retained_intron Homo_sapiens 0 977
ENST00000527850 POLA2-003 nonsense_mediated_decay Homo_sapiens 0 1314
ENST00000533192 POLA2-006 retained_intron Homo_sapiens 0 479

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