C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: OVO homolog-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025861 Ovol1-201 ENSMUSG00000024922 10090 - 19:5549137-5560575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025861 0.480±0.45 0.043±0.01 1.181±0.28 0.330±0.12 0.826±0.29 9.810±3.03 0.225±0.03 1.917±0.34 0.062±0.03 2.746±1.78 3.715±0.36 0.467±0.14 0.672±0.25 14.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001078 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0001822 IMP kidney development
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007010 IEA cytoskeleton organization
GO:0007283 IMP spermatogenesis
GO:0007498 IMP mesoderm development
GO:0008544 IMP epidermis development
GO:0009913 IEA epidermal cell differentiation
GO:0043588 IMP skin development
GO:0046872 IEA metal ion binding
GO:0051729 IMP germline cell cycle switching, mitotic to meiotic cell cycle
GO:1901994 IMP negative regulation of meiotic cell cycle phase transition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335987 OVOL1-001 protein_coding Homo_sapiens 0 1053
ENST00000531907 OVOL1-003 processed_transcript Homo_sapiens 0.00000000003 73
ENST00000532448 OVOL1-002 protein_coding Homo_sapiens 0 896

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