C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SCY1-like 1 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025890 Scyl1-201 ENSMUSG00000024941 10090 - 19:5758427-5771401 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025890
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025890 45.051±1.97 50.271±2.66 44.049±3.27 33.074±5.10 31.068±6.40 34.531±3.92 25.993±4.16 38.267±3.41 18.940±2.77 41.034±0.82 29.948±1.47 46.817±6.31 30.719±5.83 11.352±3.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005793 ISS endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 ISS Golgi apparatus
GO:0005801 ISS cis-Golgi network
GO:0005856 IEA cytoskeleton
GO:0006468 IEA protein phosphorylation
GO:0006890 ISS retrograde vesicle-mediated transport, Golgi to ER
GO:0016020 IEA membrane
GO:0030126 IDA COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000270176 SCYL1-001 protein_coding Homo_sapiens 0 2843
ENST00000279270 SCYL1-201 protein_coding Homo_sapiens 0 1133
ENST00000420247 SCYL1-002 protein_coding Homo_sapiens 0 2338
ENST00000524897 SCYL1-009 retained_intron Homo_sapiens 0 776
ENST00000524944 SCYL1-005 protein_coding Homo_sapiens 0 2619
ENST00000525364 SCYL1-014 protein_coding Homo_sapiens 0 2634
ENST00000526454 SCYL1-011 retained_intron Homo_sapiens 0 326
ENST00000527009 SCYL1-003 protein_coding Homo_sapiens 0 2577
ENST00000528545 SCYL1-013 protein_coding Homo_sapiens 0 691
ENST00000529981 SCYL1-012 retained_intron Homo_sapiens 0 374
ENST00000531601 SCYL1-010 nonsense_mediated_decay Homo_sapiens 0 896
ENST00000532290 SCYL1-016 retained_intron Homo_sapiens 9.99995e-41 171
ENST00000533862 SCYL1-006 protein_coding Homo_sapiens 0 2446
ENST00000534462 SCYL1-015 processed_transcript Homo_sapiens 0 353
ENST00000536982 LTBP3-201 protein_coding Homo_sapiens 8e-25 121

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