C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C1q and tumor necrosis factor related protein 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025940 C1qtnf9-001 ENSMUSG00000071347 10090 + 14:60768134-60780869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025940
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025940 18.215±13.93 1.746±0.44 3.189±0.00 0.155±0.02 10.956±3.34 1.044±0.31 17.552±2.64 0.844±0.08 0.143±0.07 1.153±0.24 12.051±1.01 1.655±0.47 0.387±0.16 1.119±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FK CIL_0008FK_0002 VISTA 14:60252726-60856031
CIL_0000G5 CIL_0000G5_0003 CGP 14:60634001-60780869
CIL_0007ZO CIL_0007ZO_0002 VISTA 14:60704739-61305741
CIL_0008P8 CIL_0008P8_0002 VISTA 14:60705067-61305254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005179 IEA hormone activity
GO:0005576 IEA extracellular region
GO:0005581 IEA collagen trimer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332018 C1QTNF9-001 protein_coding Homo_sapiens 0 893
ENST00000382071 C1QTNF9-002 protein_coding Homo_sapiens 0 876
ENST00000382137 C1QTNF9B-201 protein_coding Homo_sapiens 0 867
ENST00000382140 C1QTNF9B-001 protein_coding Homo_sapiens 0 878
ENST00000382145 C1QTNF9B-002 protein_coding Homo_sapiens 0 222
ENST00000556521 C1QTNF9B-003 processed_transcript Homo_sapiens 0 222

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