C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007ZO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm7 VISTA 9606 13:23315305-23916480
GeneTranscriptPositionBiotype
ENSG00000027001 (MIPEP)
mitochondrial intermediate peptidase 		ENST00000382172 (MIPEP-001) 23730189-23889419 protein_coding
ENST00000433710 (MIPEP-004) 23730189-23760573 protein_coding
ENST00000464194 (MIPEP-005) 23730189-23756830 processed_transcript
ENST00000469167 (MIPEP-002) 23881699-23889398 processed_transcript
ENST00000494139 (MIPEP-003) 23842270-23870195 processed_transcript
ENSG00000102683 (SGCG)
sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein) 		ENST00000218867 (SGCG-001) 23180952-23325165 protein_coding
ENSG00000127863 (TNFRSF19)
tumor necrosis factor receptor superfamily, member 19 		ENST00000248484 (TNFRSF19-004) 23570370-23674889 protein_coding
ENST00000382258 (TNFRSF19-001) 23579360-23669273 protein_coding
ENST00000382263 (TNFRSF19-002) 23579380-23676093 protein_coding
ENST00000403372 (TNFRSF19-201) 23570370-23676104 protein_coding
ENST00000464735 (TNFRSF19-003) 23579359-23594411 processed_transcript
ENSG00000151835 (SACS)
sacsin molecular chaperone 		ENST00000382292 (SACS-001) 23328826-23411513 protein_coding
ENST00000382298 (SACS-201) 23328823-23433728 protein_coding
ENST00000402364 (SACS-003) 23328826-23375543 protein_coding
ENST00000423156 (SACS-005) 23328833-23355483 protein_coding
ENST00000455470 (SACS-004) 23328830-23368444 protein_coding
ENST00000476776 (SACS-002) 23353736-23354890 processed_transcript
ENSG00000227893 (LINC00352)
long intergenic non-protein coding RNA 352 		ENST00000425800 (LINC00352-001) 23498796-23502874 lincRNA
ENSG00000229558 (SACS-AS1)
SACS antisense RNA 1 		ENST00000443092 (SACS-AS1-001) 23418971-23428869 lincRNA
ENSG00000232102 (MTCO3P2)
MT-CO3 pseudogene 2 		ENST00000457365 (MTCO3P2-001) 23765934-23766104 processed_pseudogene
ENSG00000232163 (RPLP1P13)
ribosomal protein, large, P1 pseudogene 13 		ENST00000434567 (RPLP1P13-001) 23373423-23374061 processed_pseudogene
ENSG00000232977 (LINC00327)
long intergenic non-protein coding RNA 327 		ENST00000443778 (LINC00327-001) 23469512-23487464 lincRNA
ENST00000575689 (LINC00327-003) 23466571-23470642 lincRNA
ENST00000576696 (LINC00327-002) 23466571-23470642 lincRNA
CIL_0007ZO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm7 VISTA 10090 14:60704739-61305741
GeneTranscriptPositionBiotype
ENSMUSG00000021990 (Spata13)
spermatogenesis associated 13 		ENSMUST00000022566 (Spata13-201) 60634729-60764556 protein_coding
ENSMUST00000159135 (Spata13-004) 60634755-60690893 processed_transcript
ENSMUST00000159169 (Spata13-006) 60634001-60691367 protein_coding
ENSMUST00000159476 (Spata13-007) 60702953-60706874 processed_transcript
ENSMUST00000159729 (Spata13-005) 60634734-60691408 protein_coding
ENSMUST00000160095 (Spata13-008) 60691975-60709569 protein_coding
ENSMUST00000160973 (Spata13-001) 60634243-60764549 protein_coding
ENSMUST00000162131 (Spata13-009) 60706733-60750016 protein_coding
ENSMUST00000162939 (Spata13-003) 60751077-60762666 retained_intron
ENSMUST00000162945 (Spata13-002) 60732906-60764549 protein_coding
ENSMUSG00000021993 (Mipep)
mitochondrial intermediate peptidase 		ENSMUST00000063562 (Mipep-201) 60784566-60903610 protein_coding
ENSMUSG00000035296 (Sgcg)
sarcoglycan, gamma (dystrophin-associated glycoprotein) 		ENSMUST00000077954 (Sgcg-001) 61221059-61258490 protein_coding
ENSMUST00000121148 (Sgcg-002) 61221444-61258424 protein_coding
ENSMUST00000129886 (Sgcg-003) 61222816-61232440 protein_coding
ENSMUSG00000048279 (Sacs)
sacsin 		ENSMUST00000089394 (Sacs-001) 61138457-61240695 protein_coding
ENSMUST00000119509 (Sacs-002) 61138491-61199666 protein_coding
ENSMUST00000119943 (Sacs-005) 61148052-61215497 protein_coding
ENSMUST00000121091 (Sacs-003) 61172990-61195663 protein_coding
ENSMUST00000150222 (Sacs-004) 61188807-61204920 retained_intron
ENSMUSG00000060548 (Tnfrsf19)
tumor necrosis factor receptor superfamily, member 19 		ENSMUST00000111234 (Tnfrsf19-201) 60963834-61046855 protein_coding
ENSMUST00000111236 (Tnfrsf19-202) 60963834-61037987 protein_coding
ENSMUSG00000071347 (C1qtnf9)
C1q and tumor necrosis factor related protein 9 		ENSMUST00000025940 (C1qtnf9-001) 60768134-60780869 protein_coding
ENSMUSG00000084951 (Mipepos)
mitochondrial intermediate peptidase, opposite strand 		ENSMUST00000155855 (Mipepos-001) 60776329-60784581 antisense
ENSMUSG00000101505 (RP24-188N22.2)
RIKEN cDNA 1700109G14 gene 		ENSMUST00000186084 (RP24-188N22.2-002) 61304825-61305308 antisense
ENSMUST00000188538 (RP24-188N22.2-003) 61294670-61318146 antisense
ENSMUST00000190737 (RP24-188N22.2-001) 61292980-61305334 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZO_0001ENSG00000027001ENST00000382172ENST00000433710ENST00000464194ENST00000469167ENST00000494139ENSG00000102683ENST00000218867ENSG00000127863ENST00000248484ENST00000382258ENST00000382263ENST00000403372ENST00000464735ENSG00000151835ENST00000382292ENST00000382298ENST00000402364ENST00000423156ENST00000455470ENST00000476776ENSG00000227893ENST00000425800ENSG00000229558ENST00000443092ENSG00000232102ENST00000457365ENSG00000232163ENST00000434567ENSG00000232977ENST00000443778ENST00000575689ENST00000576696CIL_0007ZO_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZO_0001ENSG00000027001ENST00000382172ENST00000433710ENST00000464194ENSG00000102683ENST00000218867ENSG00000127863ENST00000248484ENST00000382263ENST00000403372ENSG00000151835ENST00000382292ENST00000382298ENST00000402364ENST00000423156ENST00000455470ENST00000476776ENSG00000227893ENST00000425800ENSG00000229558ENST00000443092ENSG00000232102ENST00000457365ENSG00000232163ENST00000434567ENSG00000232977ENST00000443778ENST00000575689ENST00000576696CIL_0007ZO_0002ENSMUSG00000021990ENSMUST00000022566ENSMUST00000160973ENSMUST00000162131ENSMUST00000162939ENSMUST00000162945ENSMUSG00000021993ENSMUST00000063562ENSMUSG00000035296ENSMUST00000077954ENSMUST00000121148ENSMUSG00000048279ENSMUST00000089394ENSMUST00000119509ENSMUST00000119943ENSMUST00000121091ENSMUSG00000060548ENSMUST00000111234ENSMUST00000111236ENSMUSG00000071347ENSMUST00000025940ENSMUSG00000084951ENSMUST00000155855ENSMUSG00000101505ENSMUST00000186084ENSMUST00000188538ENSMUST00000190737
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000027001 ENST00000382172 3.044±0.00 4.719±0.00 2.503±0.00 1.508±0.72 3.071±1.69 2.969±0.44 3.655±2.17 7.247±5.23 2.864±0.67 3.139±0.00 2.112±1.11 7.292±4.32 3.823±0.40 10.631±0.21
ENST00000433710 N/A N/A N/A N/A N/A N/A 9.703±4.81 5.357±0.00 N/A N/A N/A 7.211±0.00 N/A N/A
ENST00000464194 N/A N/A N/A N/A N/A 6.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000102683 ENST00000218867 0.550±0.00 0.140±0.00 N/A 0.636±0.03 4.726±4.64 0.575±0.28 22.950±10.61 0.106±0.00 1.189±0.00 1.711±1.09 19.139±2.34 0.193±0.12 0.087±0.05 1.073±0.35
ENSG00000127863 ENST00000248484 N/A N/A 2.363±0.00 N/A N/A 0.298±0.13 1.181±0.00 N/A 0.671±0.00 2.334±0.00 0.287±0.24 6.259±0.00 1.732±0.00 N/A
ENST00000382258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382263 0.704±0.00 0.100±0.00 N/A 0.526±0.00 1.167±0.00 0.484±0.00 0.905±0.00 1.960±1.47 0.501±0.30 3.841±0.00 0.034±0.00 4.228±2.66 2.423±0.32 2.194±0.29
ENST00000403372 N/A 0.367±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00
ENST00000464735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151835 ENST00000382292 N/A 0.200±0.00 N/A 3.163±0.00 N/A 0.580±0.40 0.304±0.00 N/A N/A 0.834±0.00 N/A 3.079±0.00 N/A 1.798±0.00
ENST00000382298 N/A N/A N/A 2.979±1.44 0.322±0.13 N/A 0.173±0.00 N/A 1.472±0.00 N/A N/A N/A 0.029±0.00 0.496±0.00
ENST00000402364 0.456±0.00 0.987±0.00 N/A 1.024±0.00 0.186±0.00 0.716±0.00 N/A 0.414±0.13 0.138±0.00 0.576±0.00 1.708±0.00 0.989±0.11 0.116±0.05 0.974±0.53
ENST00000423156 N/A 1.584±0.00 N/A N/A N/A N/A N/A 0.642±0.00 0.265±0.00 N/A N/A 2.115±0.00 0.272±0.00 N/A
ENST00000455470 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00 N/A N/A 0.301±0.00 N/A
ENST00000476776 N/A N/A N/A N/A N/A N/A N/A 2.891±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000227893 ENST00000425800 0.279±0.00 0.699±0.00 N/A 0.704±0.00 0.586±0.00 0.206±0.00 0.437±0.00 0.886±0.00 0.241±0.04 0.214±0.00 0.192±0.00 0.154±0.04 0.116±0.00 0.256±0.13
ENSG00000229558 ENST00000443092 N/A 0.024±0.00 N/A 0.045±0.01 0.168±0.00 0.176±0.11 0.011±0.00 N/A N/A N/A N/A 0.010±0.00 N/A 0.518±0.10
ENSG00000232102 ENST00000457365 N/A N/A N/A 0.240±0.00 5.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.216±0.00
ENSG00000232163 ENST00000434567 N/A 0.074±0.00 N/A 0.257±0.00 0.079±0.00 N/A N/A 0.310±0.00 N/A 0.218±0.00 0.065±0.00 N/A N/A 0.222±0.08
ENSG00000232977 ENST00000443778 0.017±0.00 0.159±0.00 N/A N/A N/A 0.058±0.00 0.077±0.03 0.091±0.00 0.078±0.04 0.156±0.00 N/A 0.113±0.05 0.064±0.02 0.230±0.06
ENST00000575689 N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576696 N/A 0.060±0.00 N/A 0.100±0.00 N/A 0.048±0.00 0.195±0.14 N/A N/A 0.317±0.00 0.380±0.22 0.224±0.13 0.075±0.04 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021990 ENSMUST00000022566 0.607±0.17 4.931±1.18 1.680±0.35 1.687±0.80 0.516±0.00 0.990±0.21 0.684±0.30 1.879±0.73 1.634±0.54 1.325±0.26 0.139±0.05 2.761±1.16 0.955±0.18 0.288±0.09
ENSMUST00000159135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160973 0.748±0.00 5.942±0.89 N/A N/A 1.003±0.13 1.444±0.38 0.791±0.00 2.367±1.10 0.990±0.43 1.342±0.47 0.206±0.18 2.644±1.49 0.377±0.11 0.280±0.05
ENSMUST00000162131 N/A N/A N/A N/A N/A 5.995±0.18 N/A N/A N/A N/A N/A N/A N/A 1.055±0.00
ENSMUST00000162939 1.452±0.14 N/A N/A N/A 1.866±0.25 2.785±0.87 0.773±0.00 2.287±0.61 N/A 1.652±0.30 0.263±0.00 4.329±1.05 N/A N/A
ENSMUST00000162945 1.169±0.45 N/A 10.881±1.87 2.330±0.35 2.570±1.40 2.573±0.29 2.181±0.28 2.795±0.62 2.392±0.77 2.086±0.44 0.273±0.10 3.459±1.13 1.904±0.83 0.862±0.00
ENSMUSG00000021993 ENSMUST00000063562 9.142±0.95 20.370±10.99 7.375±0.21 5.241±2.66 14.252±2.85 6.698±2.78 17.087±0.67 13.993±1.73 10.816±2.12 6.349±1.30 17.938±0.34 15.733±5.83 5.620±2.21 71.970±18.27
ENSMUSG00000035296 ENSMUST00000077954 2.240±0.12 N/A 5.140±0.00 N/A 12.741±1.14 N/A 75.194±18.75 0.742±0.39 N/A 4.701±2.06 58.798±4.63 1.110±0.35 N/A N/A
ENSMUST00000121148 N/A N/A N/A N/A N/A 0.256±0.00 N/A N/A N/A N/A N/A 1.246±0.38 N/A N/A
ENSMUST00000129886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000048279 ENSMUST00000089394 N/A 0.160±0.00 N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A 0.281±0.00 N/A N/A
ENSMUST00000119509 N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.361±0.00 N/A N/A
ENSMUST00000119943 0.644±0.19 0.166±0.04 3.148±0.00 2.913±0.30 N/A 0.301±0.07 1.668±0.08 0.143±0.06 0.632±0.86 N/A 1.164±0.19 0.647±0.41 0.514±0.25 0.691±0.22
ENSMUST00000121091 N/A 0.267±0.09 N/A N/A N/A 0.182±0.00 N/A 0.045±0.00 0.067±0.05 N/A N/A 0.527±0.00 N/A N/A
ENSMUST00000150222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000060548 ENSMUST00000111234 4.934±4.63 9.399±2.05 9.066±0.39 4.572±1.56 1.325±0.81 0.879±0.17 0.858±0.08 0.631±0.17 0.848±0.24 13.363±3.05 1.489±0.51 4.313±1.97 0.358±0.27 0.210±0.10
ENSMUST00000111236 2.721±0.00 25.338±5.53 6.214±0.57 5.606±0.17 0.888±0.19 1.106±0.50 0.354±0.10 0.211±0.07 0.599±0.22 4.735±1.85 0.896±0.27 7.415±2.22 0.566±0.39 0.100±0.03
ENSMUSG00000071347 ENSMUST00000025940 18.215±13.93 1.746±0.44 3.189±0.00 0.155±0.02 10.956±3.34 1.044±0.31 17.552±2.64 0.844±0.08 0.143±0.07 1.153±0.24 12.051±1.01 1.655±0.47 0.387±0.16 1.119±0.40
ENSMUSG00000084951 ENSMUST00000155855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.499±0.00
ENSMUSG00000101505 ENSMUST00000186084 0.676±0.12 N/A 0.024±0.00 N/A N/A 0.279±0.00 N/A N/A N/A N/A N/A 0.181±0.11 0.181±0.21 N/A
ENSMUST00000188538 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.040±0.00 0.008±0.00 11.690±0.00
ENSMUST00000190737 N/A N/A 0.012±0.00 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 0.014±0.00 23.158±6.34

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