C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026208 Abcc2-001 ENSMUSG00000025194 10090 + 19:43782192-43840740 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026208
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026208 0.083±0.02 0.054±0.02 0.006±0.00 0.135±0.10 0.136±0.05 0.009±0.00 36.437±1.27 42.390±33.88 0.026±0.01 0.005±0.00 0.260±0.16 3.720±4.19 0.083±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EZ CIL_0000EZ_0002 CGP 19:43752996-43840740
CIL_00054Q CIL_00054Q_0002 CGP 19:43782192-43912392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005887 IDA integral component of plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 IEA drug transmembrane transport
GO:0006979 IEA response to oxidative stress
GO:0009408 IEA response to heat
GO:0009986 IEA cell surface
GO:0015732 IEA prostaglandin transport
GO:0016020 IDA membrane
GO:0016324 IDA apical plasma membrane
GO:0019904 IEA protein domain specific binding
GO:0030644 IEA cellular chloride ion homeostasis
GO:0031427 IEA response to methotrexate
GO:0042493 IEA response to drug
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0043627 IEA response to estrogen
GO:0046581 IDA intercellular canaliculus
GO:0046685 IEA response to arsenic-containing substance
GO:0070327 IEA thyroid hormone transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370449 ABCC2-001 protein_coding Homo_sapiens 0 3823

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