C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stearoyl-Coenzyme A desaturase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026221 Scd2-201 ENSMUSG00000025203 10090 + 19:44293676-44306864 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026221 149.940±0.06 270.981±62.40 64.483±2.74 113.003±16.64 56.594±9.95 141.942±25.75 7.687±0.39 24.672±1.16 56.556±58.62 148.211±11.21 4.711±1.50 202.470±66.85 78.728±59.75 23.901±9.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0002 VISTA 19:44214132-44815870

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004768 IEA stearoyl-CoA 9-desaturase activity
GO:0005506 IEA iron ion binding
GO:0005783 IDA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370355 SCD-001 protein_coding Homo_sapiens 0 1098
ENST00000455244 SCDP1-001 processed_pseudogene Homo_sapiens 0 944

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