C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proliferation-associated 2G4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026425 Pa2g4-001 ENSMUSG00000025364 10090 - 10:128557766-128565934 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026425 11.456±4.50 6.449±0.83 34.150±0.62 43.404±10.50 9.081±2.86 7.814±0.90 4.607±1.48 8.501±2.35 44.080±45.61 8.471±2.33 13.958±1.78 19.024±20.52 36.233±22.87 11.204±7.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISA DNA binding
GO:0003700 ISA sequence-specific DNA binding transcription factor activity
GO:0003723 IEA RNA binding
GO:0005634 ISA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006364 IEA rRNA processing
GO:0006417 IEA regulation of translation
GO:0030529 ISO ribonucleoprotein complex
GO:0045892 ISA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303305 PA2G4-001 protein_coding Homo_sapiens 0 2065
ENST00000414718 PA2G4P2-001 processed_pseudogene Homo_sapiens 0 1387
ENST00000418595 RP1-159M24.1-001 processed_pseudogene Homo_sapiens 0 1384
ENST00000438325 RP13-93L13.2-001 processed_pseudogene Homo_sapiens 0 1363
ENST00000442248 PA2G4P1-001 processed_pseudogene Homo_sapiens 0 1288
ENST00000473864 PA2G4P4-001 processed_pseudogene Homo_sapiens 0 1524
ENST00000548861 RP11-603J24.9-001 protein_coding Homo_sapiens 0 625
ENST00000551061 PA2G4-009 protein_coding Homo_sapiens 0 374
ENST00000552266 PA2G4-005 retained_intron Homo_sapiens 0 246
ENST00000552528 PA2G4-006 retained_intron Homo_sapiens 5.60519e-45 183
ENST00000552766 PA2G4-010 protein_coding Homo_sapiens 0 1242
ENST00000553057 PA2G4-008 protein_coding Homo_sapiens 0 695
ENST00000577406 PA2G4P3-001 processed_pseudogene Homo_sapiens 0 1055

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