C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dihydropyrimidinase-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026551 Dpysl4-001 ENSMUSG00000025478 10090 + 7:139086001-139102704 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverENSMUST00000026551
Transcript ID Adrenal Breast Kidney Liver
ENSMUST00000026551 0.072±0.01 0.066±0.02 0.050±0.00 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LO CIL_0001LO_0002 CGP 7:138940730-139102704
CIL_0001LP CIL_0001LP_0002 CGP 7:139086001-139213307

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006208 IEA pyrimidine nucleobase catabolic process
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity
GO:0016812 IEA hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0048666 IEA neuron development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311151 DPYSL2-001 protein_coding Homo_sapiens 0 706
ENST00000324989 CRMP1-001 protein_coding Homo_sapiens 0 532
ENST00000338492 DPYSL4-001 protein_coding Homo_sapiens 0 1890
ENST00000368627 DPYSL4-004 protein_coding Homo_sapiens 0 704
ENST00000397890 CRMP1-003 protein_coding Homo_sapiens 0 558
ENST00000474808 DPYSL2-003 processed_transcript Homo_sapiens 0.00000000000005 82
ENST00000493882 DPYSL4-003 processed_transcript Homo_sapiens 0 427
ENST00000506216 CRMP1-005 processed_transcript Homo_sapiens 0 448
ENST00000511535 CRMP1-004 processed_transcript Homo_sapiens 0 531
ENST00000512574 CRMP1-002 protein_coding Homo_sapiens 0 532
ENST00000521913 DPYSL2-005 protein_coding Homo_sapiens 0 695
ENST00000523027 DPYSL2-002 protein_coding Homo_sapiens 0 695

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