C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026896 St8sia2-201 ENSMUSG00000025789 10090 - 7:73939119-74013682 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026896
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026896 0.481±0.38 0.599±0.08 0.214±0.02 16.795±13.73 0.199±0.05 0.072±0.03 0.112±0.03 0.129±0.02 0.035±0.03 3.065±0.41 0.032±0.01 0.884±0.12 0.753±0.83 3.452±1.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00073Q CIL_00073Q_0002 CGP 7:73740307-74013682
CIL_0001GT CIL_0001GT_0002 CGP 7:73939119-74554780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001574 IEA ganglioside biosynthetic process
GO:0003828 IDA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0005769 IDA early endosome
GO:0006491 IEA N-glycan processing
GO:0009311 IEA oligosaccharide metabolic process
GO:0030173 IEA integral component of Golgi membrane
GO:0055037 IDA recycling endosome
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268164 ST8SIA2-001 protein_coding Homo_sapiens 0 2370
ENST00000539113 ST8SIA2-002 protein_coding Homo_sapiens 0 1310
ENST00000555434 ST8SIA2-003 protein_coding Homo_sapiens 0 1129
ENST00000556382 ST8SIA2-004 retained_intron Homo_sapiens 0 821

Loading