C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001GT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018788-ENSDARG00000018726 CGP 7955 18:24811190-24960925
GeneTranscriptPositionBiotype
ENSDARG00000018726 (slco3a1)
solute carrier organic anion transporter family, member 3A1 		ENSDART00000013363 (slco3a1-001) 24857679-24960925 protein_coding
ENSDARG00000018788 (st8sia2)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 		ENSDART00000013082 (st8sia2-001) 24811190-24835541 protein_coding
CIL_0001GT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025789-ENSMUSG00000025790 CGP 10090 7:73939119-74554780
GeneTranscriptPositionBiotype
ENSMUSG00000025789 (St8sia2)
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 		ENSMUST00000026896 (St8sia2-201) 73939119-74013682 protein_coding
ENSMUSG00000025790 (Slco3a1)
solute carrier organic anion transporter family, member 3a1 		ENSMUST00000026897 (Slco3a1-001) 74281858-74554614 protein_coding
ENSMUST00000098371 (Slco3a1-002) 74275419-74554633 protein_coding
ENSMUST00000107453 (Slco3a1-003) 74295371-74554780 protein_coding
ENSMUST00000129292 (Slco3a1-005) 74504386-74530109 processed_transcript
ENSMUST00000134539 (Slco3a1-007) 74346786-74554474 protein_coding
ENSMUST00000136389 (Slco3a1-006) 74359654-74504335 retained_intron
ENSMUST00000138099 (Slco3a1-004) 74504239-74552594 protein_coding
ENSMUST00000142175 (Slco3a1-008) 74331008-74347231 retained_intron
ENSMUSG00000085161 (Gm7580)
predicted gene 7580 		ENSMUST00000132826 (Gm7580-001) 74392698-74411233 antisense
ENSMUSG00000098303 (Gm27459)
predicted gene, 27459 		ENSMUST00000184860 (Gm27459-201) 74235558-74235664 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GT_0001ENSDARG00000018726ENSDART00000013363ENSDARG00000018788ENSDART00000013082CIL_0001GT_0002ENSMUSG00000025789ENSMUST00000026896ENSMUSG00000025790ENSMUST00000026897ENSMUST00000098371ENSMUST00000107453ENSMUST00000129292ENSMUST00000134539ENSMUST00000136389ENSMUST00000138099ENSMUST00000142175ENSMUSG00000085161ENSMUST00000132826ENSMUSG00000098303ENSMUST00000184860
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001GT_0001ENSDARG00000018726ENSDART00000013363ENSDARG00000018788ENSDART00000013082CIL_0001GT_0002ENSMUSG00000025789ENSMUST00000026896ENSMUSG00000025790ENSMUST00000026897ENSMUST00000098371ENSMUST00000107453ENSMUST00000134539ENSMUSG00000085161ENSMUST00000132826ENSMUSG00000098303ENSMUST00000184860
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000018726 ENSDART00000013363 N/A N/A N/A 2.354±2.28 N/A N/A 5.660±2.04 N/A 0.052±0.00 N/A N/A N/A N/A N/A
ENSDARG00000018788 ENSDART00000013082 N/A N/A N/A 2.542±1.52 N/A N/A 0.023±0.00 0.346±0.08 N/A N/A 0.347±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025789 ENSMUST00000026896 0.481±0.38 0.599±0.08 0.214±0.02 16.795±13.73 0.199±0.05 0.072±0.03 0.112±0.03 0.129±0.02 0.035±0.03 3.065±0.41 0.032±0.01 0.884±0.12 0.753±0.83 3.452±1.32
ENSMUSG00000025790 ENSMUST00000026897 1.726±0.48 2.977±0.79 5.316±0.58 3.233±0.37 2.351±0.79 2.785±0.41 7.458±1.03 3.045±0.42 0.323±0.10 9.565±1.80 2.332±0.38 9.175±1.88 2.550±0.90 3.279±0.73
ENSMUST00000098371 4.276±0.29 2.971±0.13 9.181±0.71 2.621±1.14 4.512±1.04 3.259±1.44 21.501±3.41 9.678±1.24 0.896±0.39 52.073±6.55 11.737±1.16 16.033±9.96 2.784±1.18 21.724±5.67
ENSMUST00000107453 N/A 3.176±0.36 N/A N/A N/A 1.700±0.06 N/A N/A 0.266±0.00 N/A N/A 7.089±0.74 N/A N/A
ENSMUST00000129292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134539 N/A 8.911±1.27 N/A N/A N/A 9.229±0.00 N/A N/A 1.166±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085161 ENSMUST00000132826 N/A N/A N/A N/A 0.181±0.00 N/A 0.179±0.00 N/A N/A N/A N/A 0.146±0.03 N/A 0.167±0.01
ENSMUSG00000098303 ENSMUST00000184860 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.732±0.00 N/A N/A

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