C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 3a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026897 Slco3a1-001 ENSMUSG00000025790 10090 - 7:74281858-74554614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026897 1.726±0.48 2.977±0.79 5.316±0.58 3.233±0.37 2.351±0.79 2.785±0.41 7.458±1.03 3.045±0.42 0.323±0.10 9.565±1.80 2.332±0.38 9.175±1.88 2.550±0.90 3.279±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GT CIL_0001GT_0002 CGP 7:73939119-74554780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318445 SLCO3A1-001 protein_coding Homo_sapiens 0 2996
ENST00000424469 SLCO3A1-002 protein_coding Homo_sapiens 0 2702
ENST00000553653 SLCO3A1-003 retained_intron Homo_sapiens 0 2350
ENST00000555210 SLCO3A1-013 nonsense_mediated_decay Homo_sapiens 0 798
ENST00000555513 SLCO3A1-011 processed_transcript Homo_sapiens 0 652
ENST00000555549 SLCO3A1-005 processed_transcript Homo_sapiens 0 1969
ENST00000555769 SLCO3A1-006 processed_transcript Homo_sapiens 0 2012
ENST00000555892 SLCO3A1-012 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000556649 SLCO3A1-009 processed_transcript Homo_sapiens 0 501
ENST00000564072 SLCO3A1-014 retained_intron Homo_sapiens 0 652

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