C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-5 homolog A (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026994 Unc5a-001 ENSMUSG00000025876 10090 + 13:54949411-55006018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverOvaryTestisENSMUST00000026994
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Ovary Testis
ENSMUST00000026994 1.508±0.00 1.339±0.32 2.612±0.24 2.102±0.22 2.283±0.00 0.479±0.04 0.122±0.00 0.194±0.00 0.722±0.12 0.098±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098R CIL_00098R_0002 VISTA 13:54491283-55092527
CIL_0002NA CIL_0002NA_0002 CGP 13:54789377-55006018
CIL_0002N5 CIL_0002N5_0002 CGP 13:54949411-55021385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006915 IEA apoptotic process
GO:0007165 IEA signal transduction
GO:0016021 IEA integral component of membrane
GO:0033564 IMP anterior/posterior axon guidance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329542 UNC5A-001 protein_coding Homo_sapiens 0 3424
ENST00000509580 UNC5A-003 protein_coding Homo_sapiens 0 1312
ENST00000513890 UNC5A-002 nonsense_mediated_decay Homo_sapiens 0 614

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