C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 6c1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027569 Slco6c1-001 ENSMUSG00000026331 10090 - 1:97059038-97128206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLungOvaryPlacentaTestisENSMUST00000027569
Transcript ID Brain Colon Kidney Lung Ovary Placenta Testis
ENSMUST00000027569 0.026±0.00 0.078±0.00 0.026±0.01 0.028±0.00 0.010±0.00 0.008±0.00 6.937±2.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008514 IEA organic anion transmembrane transporter activity
GO:0015711 IEA organic anion transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310954 SLCO4C1-001 protein_coding Homo_sapiens 0.0003 53
ENST00000379807 SLCO6A1-002 protein_coding Homo_sapiens 5.04467e-44 183
ENST00000389019 SLCO6A1-003 protein_coding Homo_sapiens 5.04467e-44 183
ENST00000506729 SLCO6A1-001 protein_coding Homo_sapiens 6.02558e-44 183
ENST00000513675 SLCO6A1-004 protein_coding Homo_sapiens 3e-35 154

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