C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myogenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027730 Myog-001 ENSMUSG00000026459 10090 + 1:134289989-134292548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENSMUST00000027730
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENSMUST00000027730 0.021±0.00 0.011±0.00 0.540±0.47 1.254±0.36 0.020±0.00 0.039±0.00 0.653±1.29 0.844±0.11 2.629±0.69 0.125±0.07 0.041±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000987 IDA core promoter proximal region sequence-specific DNA binding
GO:0001047 IDA core promoter binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001228 IC RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001503 IMP ossification
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003705 TAS RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0007049 IEA cell cycle
GO:0007517 IGI muscle organ development
GO:0007519 IDA skeletal muscle tissue development
GO:0008285 IDA negative regulation of cell proliferation
GO:0010831 IDA positive regulation of myotube differentiation
GO:0014737 IMP positive regulation of muscle atrophy
GO:0014842 IMP regulation of satellite cell proliferation
GO:0014873 ISS response to muscle activity involved in regulation of muscle adaptation
GO:0014878 ISS response to electrical stimulus involved in regulation of muscle adaptation
GO:0014891 IMP striated muscle atrophy
GO:0014894 IDA response to denervation involved in regulation of muscle adaptation
GO:0014902 IGI myotube differentiation
GO:0031490 IDA chromatin DNA binding
GO:0032993 ISS protein-DNA complex
GO:0042789 IC mRNA transcription from RNA polymerase II promoter
GO:0043565 IDA sequence-specific DNA binding
GO:0045663 IDA positive regulation of myoblast differentiation
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0048741 IMP skeletal muscle fiber development
GO:0048743 IMP positive regulation of skeletal muscle fiber development
GO:0070888 IDA E-box binding
GO:0071158 IDA positive regulation of cell cycle arrest
GO:0071285 IDA cellular response to lithium ion
GO:0071363 IDA cellular response to growth factor stimulus
GO:0071392 IDA cellular response to estradiol stimulus
GO:1901739 IMP regulation of myoblast fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241651 MYOG-001 protein_coding Homo_sapiens 0 1465

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