C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myogenin (myogenic factor 4)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000241651 MYOG-001 ENSG00000122180 9606 - 1:203083132-203086036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartMusclePlacentaTestisENST00000241651
Transcript ID Adipose Brain Breast Colon Heart Muscle Placenta Testis
ENST00000241651 0.028±0.00 0.178±0.05 0.473±0.00 0.040±0.00 0.199±0.00 16.621±4.47 0.050±0.00 1.789±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TV CIL_0000TV_0002 CGP 1:203026498-203086036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000977 ISS RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000987 IEA core promoter proximal region sequence-specific DNA binding
GO:0001047 ISS core promoter binding
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001503 IEA ossification
GO:0003677 IEA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISS:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 ISS transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007049 IEA cell cycle
GO:0007517 IEA muscle organ development
GO:0007519 TAS skeletal muscle tissue development
GO:0008285 ISS negative regulation of cell proliferation
GO:0010831 ISS positive regulation of myotube differentiation
GO:0014737 ISS positive regulation of muscle atrophy
GO:0014842 ISS regulation of satellite cell proliferation
GO:0014873 ISS response to muscle activity involved in regulation of muscle adaptation
GO:0014878 ISS response to electrical stimulus involved in regulation of muscle adaptation
GO:0014891 ISS striated muscle atrophy
GO:0014894 ISS response to denervation involved in regulation of muscle adaptation
GO:0014902 IEA myotube differentiation
GO:0031490 ISS chromatin DNA binding
GO:0032993 ISS protein-DNA complex
GO:0042692 TAS muscle cell differentiation
GO:0042693 ISS muscle cell fate commitment
GO:0042789 TAS mRNA transcription from RNA polymerase II promoter
GO:0043565 IDA sequence-specific DNA binding
GO:0045663 ISS positive regulation of myoblast differentiation
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 ISS positive regulation of transcription from RNA polymerase II promoter
GO:0046982 ISS protein heterodimerization activity
GO:0046983 IEA protein dimerization activity
GO:0048741 IEA skeletal muscle fiber development
GO:0048743 ISS positive regulation of skeletal muscle fiber development
GO:0051149 TAS positive regulation of muscle cell differentiation
GO:0070888 ISS E-box binding
GO:0071158 ISS positive regulation of cell cycle arrest
GO:0071285 IEA cellular response to lithium ion
GO:0071363 IEA cellular response to growth factor stimulus
GO:0071392 ISS cellular response to estradiol stimulus
GO:1901739 ISS regulation of myoblast fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027730 Myog-001 protein_coding Mus_musculus 0 1465

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