C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand calcium binding domain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027775 Efcab2-201 ENSMUSG00000026495 10090 + 1:178405881-178483247 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000027775
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027775 0.332±0.12 0.281±0.08 0.379±0.00 0.579±0.18 0.365±0.16 0.166±0.09 3.970±0.00 0.404±0.19 0.724±0.21 1.816±0.48 0.311±0.16 0.352±0.17 9.057±1.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L4 CIL_0000L4_0003 CGP 1:178324343-178483247
CIL_0001DF CIL_0001DF_0003 CGP 1:178405881-178932855

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366521 EFCAB2-007 protein_coding Homo_sapiens 0 538
ENST00000366523 EFCAB2-003 protein_coding Homo_sapiens 0 540
ENST00000473686 EFCAB2-005 processed_transcript Homo_sapiens 0 455
ENST00000495271 EFCAB2-006 processed_transcript Homo_sapiens 0 353

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