C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phytanoyl-CoA hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027975 Phyh-001 ENSMUSG00000026664 10090 + 2:4919019-4938730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027975 73.390±34.68 194.943±30.62 43.732±1.92 16.542±12.87 106.618±31.78 63.280±4.13 194.895±147.90 212.209±8.10 400.336±361.45 31.766±2.08 97.496±4.27 36.378±9.78 24.671±12.35 4.643±1.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763
CIL_00015C CIL_00015C_0002 CGP 2:4919019-4985748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001561 IDA fatty acid alpha-oxidation
GO:0003824 IDA catalytic activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005777 TAS peroxisome
GO:0006720 IEA isoprenoid metabolic process
GO:0031418 IEA L-ascorbic acid binding
GO:0046872 IEA metal ion binding
GO:0048037 IEA cofactor binding
GO:0048244 IEA phytanoyl-CoA dioxygenase activity
GO:0097089 IEA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000129568 PHYH (2 of 2)-201 protein_coding Danio_rerio 0 231
ENSDART00000002783 phyh-001 protein_coding Danio_rerio 0 231
ENST00000263038 PHYH-001 protein_coding Homo_sapiens 0 784
ENST00000396913 PHYH-002 protein_coding Homo_sapiens 0 713
ENST00000396920 PHYH-005 protein_coding Homo_sapiens 0 736
ENST00000453759 PHYH-004 protein_coding Homo_sapiens 0 665
ENST00000463730 PHYH-006 retained_intron Homo_sapiens 0 198
ENST00000479604 PHYH-003 protein_coding Homo_sapiens 0 481

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