C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phytanoyl-CoA 2-hydroxylase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263038 PHYH-001 ENSG00000107537 9606 - 10:13277800-13300101 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263038 20.884±0.00 8.082±0.00 14.760±0.00 10.759±4.51 14.981±12.96 11.234±6.00 32.137±20.92 63.874±27.61 19.345±14.22 4.166±2.08 73.884±37.14 13.941±8.10 8.665±1.75 7.294±6.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0001 VISTA 10:13045564-13647145

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001561 IDA fatty acid alpha-oxidation
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0005777 IDA peroxisome
GO:0005782 TAS peroxisomal matrix
GO:0006720 IDA isoprenoid metabolic process
GO:0009055 TAS electron carrier activity
GO:0031418 IEA L-ascorbic acid binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0048037 IDA cofactor binding
GO:0048244 IDA phytanoyl-CoA dioxygenase activity
GO:0097089 IDA methyl-branched fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027975 Phyh-001 protein_coding Mus_musculus 0 784
ENSMUST00000146933 Phyh-002 processed_transcript Mus_musculus 0 394

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