C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027997 Rgs5-001 ENSMUSG00000026678 10090 + 1:169655501-169695813 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027997
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027997 58.081±1.18 7.109±1.53 60.190±1.06 12.931±2.15 26.901±5.39 33.916±5.37 75.449±4.23 16.526±1.49 4.323±4.03 3.816±1.07 44.665±4.55 12.168±4.87 29.879±17.99 1.138±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AF CIL_0008AF_0002 VISTA 1:169085394-169686297
CIL_0009CL CIL_0009CL_0002 VISTA 1:169176672-169778007
CIL_0004MJ CIL_0004MJ_0002 CGP 1:169655501-169747642

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IBA GTPase activator activity
GO:0005737 IBA cytoplasm
GO:0005886 IBA plasma membrane
GO:0007165 IEA signal transduction
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IBA positive regulation of GTPase activity
GO:0045744 IEA negative regulation of G-protein coupled receptor protein signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313961 RGS5-001 protein_coding Homo_sapiens 0 754
ENST00000367903 RGS5-002 protein_coding Homo_sapiens 0 658
ENST00000428971 RGS5-011 processed_transcript Homo_sapiens 9.99995e-41 171
ENST00000469495 RGS5-003 processed_transcript Homo_sapiens 0 237
ENST00000525894 RGS5-005 retained_intron Homo_sapiens 0 536
ENST00000527988 RGS5-004 protein_coding Homo_sapiens 0 453
ENST00000530241 RGS5-009 processed_transcript Homo_sapiens 0 364
ENST00000530507 RGS5-006 protein_coding Homo_sapiens 0 689
ENST00000531476 RGS5-007 protein_coding Homo_sapiens 0 219
ENST00000531954 RGS5-010 processed_transcript Homo_sapiens 0 484
ENST00000534288 RGS5-008 processed_transcript Homo_sapiens 0 313
ENST00000618415 RGS5-201 protein_coding Homo_sapiens 0 662

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