C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008AF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs762 VISTA 9606 1:163172151-163773052
GeneTranscriptPositionBiotype
ENSG00000143228 (NUF2)
NUF2, NDC80 kinetochore complex component
ENST00000271452 (NUF2-001) 163321954-163355764 protein_coding
ENST00000367900 (NUF2-002) 163321935-163355764 protein_coding
ENST00000442820 (NUF2-004) 163321935-163339477 protein_coding
ENST00000450453 (NUF2-003) 163321890-163336848 protein_coding
ENST00000487578 (NUF2-007) 163321986-163328561 retained_intron
ENST00000490881 (NUF2-006) 163321964-163338093 processed_transcript
ENST00000497990 (NUF2-005) 163322046-163345718 nonsense_mediated_decay
ENST00000524800 (NUF2-008) 163321900-163355727 protein_coding
ENST00000527120 (NUF2-010) 163339281-163343823 retained_intron
ENST00000527439 (NUF2-012) 163338015-163346240 retained_intron
ENST00000531529 (NUF2-011) 163340255-163343815 retained_intron
ENST00000534289 (NUF2-009) 163266576-163336786 protein_coding
ENSG00000143248 (RGS5)
regulator of G-protein signaling 5
ENST00000313961 (RGS5-001) 163142304-163203113 protein_coding
ENST00000367903 (RGS5-002) 163147056-163217636 protein_coding
ENST00000428971 (RGS5-011) 163161954-163321772 processed_transcript
ENST00000469495 (RGS5-003) 163111121-163152716 processed_transcript
ENST00000525894 (RGS5-005) 163152473-163202915 retained_intron
ENST00000527988 (RGS5-004) 163147342-163202835 protein_coding
ENST00000530241 (RGS5-009) 163152610-163321751 processed_transcript
ENST00000530507 (RGS5-006) 163147117-163202903 protein_coding
ENST00000531476 (RGS5-007) 163152608-163202898 protein_coding
ENST00000531954 (RGS5-010) 163147474-163321735 processed_transcript
ENST00000534288 (RGS5-008) 163152650-163321787 processed_transcript
ENST00000618415 (RGS5-201) 163142299-163321791 protein_coding
ENSG00000225122 (RP11-408E1.1)
ENST00000430516 (RP11-408E1.1-001) 163422405-163423164 unprocessed_pseudogene
ENSG00000225755 (RP11-267N12.2)
ENST00000450164 (RP11-267N12.2-001) 163237214-163239197 processed_pseudogene
ENSG00000232892 (RP11-267N12.1)
ENST00000415437 (RP11-267N12.1-001) 163161675-163213023 antisense
ENSG00000237756 (RP11-77M5.1)
ENST00000416401 (RP11-77M5.1-001) 163259850-163260659 lincRNA
CIL_0008AF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs762 VISTA 10090 1:169085394-169686297
GeneTranscriptPositionBiotype
ENSMUSG00000026678 (Rgs5)
regulator of G-protein signaling 5
ENSMUST00000027997 (Rgs5-001) 169655501-169695813 protein_coding
ENSMUST00000152809 (Rgs5-002) 169655522-169683949 processed_transcript
ENSMUSG00000026683 (Nuf2)
NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)
ENSMUST00000028000 (Nuf2-201) 169498312-169531428 protein_coding
ENSMUST00000111368 (Nuf2-202) 169497934-169531464 protein_coding
ENSMUSG00000058622 (Gm5265)
predicted pseudogene 5265
ENSMUST00000076828 (Gm5265-201) 169453528-169453869 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AF_0001ENSG00000143228ENST00000271452ENST00000367900ENST00000442820ENST00000450453ENST00000487578ENST00000490881ENST00000497990ENST00000524800ENST00000527120ENST00000527439ENST00000531529ENST00000534289ENSG00000143248ENST00000313961ENST00000367903ENST00000428971ENST00000469495ENST00000525894ENST00000527988ENST00000530241ENST00000530507ENST00000531476ENST00000531954ENST00000534288ENST00000618415ENSG00000225122ENST00000430516ENSG00000225755ENST00000450164ENSG00000232892ENST00000415437ENSG00000237756ENST00000416401CIL_0008AF_0002ENSMUSG00000026678ENSMUST00000027997ENSMUST00000152809ENSMUSG00000026683ENSMUST00000028000ENSMUST00000111368ENSMUSG00000058622ENSMUST00000076828
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AF_0001ENSG00000143228ENST00000271452ENST00000367900ENSG00000143248ENST00000313961ENST00000367903ENST00000618415ENSG00000225122ENST00000430516ENSG00000225755ENST00000450164ENSG00000232892ENST00000415437ENSG00000237756ENST00000416401CIL_0008AF_0002ENSMUSG00000026678ENSMUST00000027997ENSMUST00000152809ENSMUSG00000026683ENSMUST00000028000ENSMUST00000111368ENSMUSG00000058622ENSMUST00000076828
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143228 ENST00000271452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.753±0.00 1.701±0.00 5.383±0.00
ENST00000367900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.639±0.00 N/A 9.075±0.00
ENST00000442820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450453 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000143248 ENST00000313961 10.323±0.00 6.819±0.00 7.554±0.00 7.241±0.00 13.774±6.60 25.622±15.65 36.082±14.88 6.622±5.71 21.665±21.19 20.516±13.43 10.564±2.84 12.736±2.80 3.692±1.97 12.829±8.45
ENST00000367903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.893±0.00 N/A
ENST00000428971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618415 3.184±0.00 N/A 4.162±0.00 4.322±1.67 9.008±0.00 6.748±0.00 7.887±4.65 2.839±0.00 N/A 2.628±0.00 6.088±0.00 N/A 1.068±0.00 13.315±0.00
ENSG00000225122 ENST00000430516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.674±0.00
ENSG00000225755 ENST00000450164 N/A 0.028±0.00 N/A N/A N/A 0.282±0.00 0.059±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00
ENSG00000232892 ENST00000415437 N/A 0.008±0.00 0.020±0.00 N/A 0.011±0.00 0.086±0.00 0.073±0.00 0.004±0.00 0.125±0.00 0.107±0.00 N/A 0.128±0.10 0.009±0.00 0.027±0.02
ENSG00000237756 ENST00000416401 N/A 0.120±0.00 N/A 0.081±0.00 N/A N/A 0.107±0.03 N/A N/A N/A N/A 0.120±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026678 ENSMUST00000027997 58.081±1.18 7.109±1.53 60.190±1.06 12.931±2.15 26.901±5.39 33.916±5.37 75.449±4.23 16.526±1.49 4.323±4.03 3.816±1.07 44.665±4.55 12.168±4.87 29.879±17.99 1.138±0.08
ENSMUST00000152809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.327±2.50 N/A N/A
ENSMUSG00000026683 ENSMUST00000028000 0.674±0.64 0.256±0.03 0.537±0.04 3.506±2.35 0.321±0.10 1.116±0.32 0.150±0.00 0.175±0.07 14.353±9.03 0.168±0.04 0.064±0.07 2.241±2.56 10.874±10.31 10.895±2.13
ENSMUST00000111368 0.110±0.00 0.169±0.02 0.056±0.00 0.727±0.00 0.128±0.03 0.183±0.00 0.067±0.03 N/A 2.091±0.96 0.160±0.00 N/A 0.562±0.29 1.480±1.23 N/A
ENSMUSG00000058622 ENSMUST00000076828 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.381±0.00

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