C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0008AF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs762 | VISTA | 9606 | 1:163172151-163773052  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000143228  (NUF2)NUF2, NDC80 kinetochore complex component |
ENST00000271452 (NUF2-001)
|
163321954-163355764 | protein_coding | |
|
ENST00000367900 (NUF2-002)
|
163321935-163355764 | protein_coding | ||
|
ENST00000442820 (NUF2-004)
|
163321935-163339477 | protein_coding | ||
|
ENST00000450453 (NUF2-003)
|
163321890-163336848 | protein_coding | ||
|
ENST00000487578 (NUF2-007)
|
163321986-163328561 | retained_intron | ||
|
ENST00000490881 (NUF2-006)
|
163321964-163338093 | processed_transcript | ||
|
ENST00000497990 (NUF2-005)
|
163322046-163345718 | nonsense_mediated_decay | ||
|
ENST00000524800 (NUF2-008)
|
163321900-163355727 | protein_coding | ||
|
ENST00000527120 (NUF2-010)
|
163339281-163343823 | retained_intron | ||
|
ENST00000527439 (NUF2-012)
|
163338015-163346240 | retained_intron | ||
|
ENST00000531529 (NUF2-011)
|
163340255-163343815 | retained_intron | ||
|
ENST00000534289 (NUF2-009)
|
163266576-163336786 | protein_coding | ||
|
ENSG00000143248 (RGS5) regulator of G-protein signaling 5 |
ENST00000313961 (RGS5-001)
|
163142304-163203113 | protein_coding | |
|
ENST00000367903 (RGS5-002)
|
163147056-163217636 | protein_coding | ||
|
ENST00000428971 (RGS5-011)
|
163161954-163321772 | processed_transcript | ||
|
ENST00000469495 (RGS5-003)
|
163111121-163152716 | processed_transcript | ||
|
ENST00000525894 (RGS5-005)
|
163152473-163202915 | retained_intron | ||
|
ENST00000527988 (RGS5-004)
|
163147342-163202835 | protein_coding | ||
|
ENST00000530241 (RGS5-009)
|
163152610-163321751 | processed_transcript | ||
|
ENST00000530507 (RGS5-006)
|
163147117-163202903 | protein_coding | ||
|
ENST00000531476 (RGS5-007)
|
163152608-163202898 | protein_coding | ||
|
ENST00000531954 (RGS5-010)
|
163147474-163321735 | processed_transcript | ||
|
ENST00000534288 (RGS5-008)
|
163152650-163321787 | processed_transcript | ||
|
ENST00000618415 (RGS5-201)
|
163142299-163321791 | protein_coding | ||
|
ENSG00000225122 (RP11-408E1.1) |
ENST00000430516 (RP11-408E1.1-001)
|
163422405-163423164 | unprocessed_pseudogene | |
|
ENSG00000225755 (RP11-267N12.2) |
ENST00000450164 (RP11-267N12.2-001)
|
163237214-163239197 | processed_pseudogene | |
|
ENSG00000232892 (RP11-267N12.1) |
ENST00000415437 (RP11-267N12.1-001)
|
163161675-163213023 | antisense | |
|
ENSG00000237756 (RP11-77M5.1) |
ENST00000416401 (RP11-77M5.1-001)
|
163259850-163260659 | lincRNA | |
| CIL_0008AF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs762 | VISTA | 10090 | 1:169085394-169686297 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026678 (Rgs5) regulator of G-protein signaling 5 |
ENSMUST00000027997 (Rgs5-001)
|
169655501-169695813 | protein_coding | |
|
ENSMUST00000152809 (Rgs5-002)
|
169655522-169683949 | processed_transcript | ||
|
ENSMUSG00000026683 (Nuf2) NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae) |
ENSMUST00000028000 (Nuf2-201)
|
169498312-169531428 | protein_coding | |
|
ENSMUST00000111368 (Nuf2-202)
|
169497934-169531464 | protein_coding | ||
|
ENSMUSG00000058622 (Gm5265) predicted pseudogene 5265 |
ENSMUST00000076828 (Gm5265-201)
|
169453528-169453869 | processed_pseudogene | |
Expression Patterns
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