C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028139 Med27-001 ENSMUSG00000026799 10090 + 2:29346819-29524793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028139 14.931±0.86 11.995±3.87 14.734±3.49 22.312±13.24 11.221±4.60 6.615±2.11 9.277±1.35 8.721±1.53 9.894±5.06 15.689±1.65 5.310±0.60 12.180±5.42 9.545±4.23 11.480±5.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 ISS transcription coactivator activity
GO:0005634 ISS nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0016592 IDA mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292035 MED27-001 protein_coding Homo_sapiens 0 1131
ENST00000357028 MED27-002 protein_coding Homo_sapiens 0 697
ENST00000444872 MED27-004 processed_transcript Homo_sapiens 0 189
ENST00000474263 MED27-003 protein_coding Homo_sapiens 0 442
ENST00000514280 CRSP8P-001 processed_pseudogene Homo_sapiens 0 1072

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