C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytohesin 1 interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028175 Cytip-001 ENSMUSG00000026832 10090 - 2:58129137-58160495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000028175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028175 0.461±0.04 1.063±0.16 0.226±0.13 0.011±0.00 9.210±0.66 0.687±0.06 0.392±0.16 0.278±0.21 6.640±0.00 0.065±0.07 0.357±0.18 0.061±0.05 0.591±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088Y CIL_00088Y_0002 VISTA 2:57578887-58179847
CIL_000754 CIL_000754_0002 CGP 2:58045113-58195532
CIL_000755 CIL_000755_0002 CGP 2:58129137-58357895

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005938 IEA cell cortex
GO:0030155 IEA regulation of cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264192 CYTIP-001 protein_coding Homo_sapiens 0 1055
ENST00000418920 CYTIP-003 protein_coding Homo_sapiens 0 518
ENST00000457793 CYTIP-002 nonsense_mediated_decay Homo_sapiens 0 507

Loading