C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00088Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs794 VISTA 9606 2:156849033-157450009
GeneTranscriptPositionBiotype
ENSG00000115165 (CYTIP)
cytohesin 1 interacting protein 		ENST00000264192 (CYTIP-001) 157414619-157444142 protein_coding
ENST00000418920 (CYTIP-003) 157416046-157439414 protein_coding
ENST00000435117 (CYTIP-007) 157434709-157488829 protein_coding
ENST00000439355 (CYTIP-008) 157430913-157488960 protein_coding
ENST00000457793 (CYTIP-002) 157416071-157444098 nonsense_mediated_decay
ENST00000462109 (CYTIP-004) 157434161-157444092 retained_intron
ENST00000483929 (CYTIP-005) 157434416-157444086 retained_intron
ENST00000497432 (CYTIP-009) 157430871-157488961 processed_transcript
ENSG00000136541 (ERMN)
ermin, ERM-like protein 		ENST00000397283 (ERMN-001) 157318639-157327713 protein_coding
ENST00000409216 (ERMN-006) 157321685-157325824 protein_coding
ENST00000409395 (ERMN-005) 157320997-157325873 nonsense_mediated_decay
ENST00000409925 (ERMN-008) 157321739-157325659 protein_coding
ENST00000410096 (ERMN-002) 157318625-157325934 protein_coding
ENST00000411762 (ERMN-003) 157321669-157327309 protein_coding
ENST00000419116 (ERMN-007) 157321782-157325901 protein_coding
ENST00000420317 (ERMN-004) 157321645-157327248 protein_coding
ENST00000420719 (ERMN-009) 157321002-157325824 protein_coding
ENSG00000136542 (GALNT5)
polypeptide N-acetylgalactosaminyltransferase 5 		ENST00000259056 (GALNT5-001) 157257598-157314211 protein_coding
ENST00000461704 (GALNT5-003) 157301486-157302597 processed_transcript
ENST00000463418 (GALNT5-002) 157300803-157302597 processed_transcript
ENSG00000213194 (AC016732.2)
 ENST00000434574 (AC016732.2-001) 157210847-157211539 processed_pseudogene
ENSG00000216054 (AC019201.1)
 ENST00000401235 (AC019201.1-201) 157441550-157441639 miRNA
ENSG00000222404 (RN7SKP281)
RNA, 7SK small nuclear pseudogene 281 		ENST00000410472 (RN7SKP281-201) 157298807-157299158 misc_RNA
ENSG00000230562 (FAM133DP)
family with sequence similarity 133, member D, pseudogene 		ENST00000464802 (FAM133DP-001) 157379724-157380414 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_00088Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs794 VISTA 10090 2:57578887-58179847
GeneTranscriptPositionBiotype
ENSMUSG00000026828 (Galnt5)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 		ENSMUST00000112616 (Galnt5-001) 57997884-58039878 protein_coding
ENSMUST00000144671 (Galnt5-002) 57997884-58045860 processed_transcript
ENSMUST00000166729 (Galnt5-201) 57997884-58045860 protein_coding
ENSMUSG00000026830 (Ermn)
ermin, ERM-like protein 		ENSMUST00000090940 (Ermn-001) 58045113-58052864 protein_coding
ENSMUSG00000026832 (Cytip)
cytohesin 1 interacting protein 		ENSMUST00000028175 (Cytip-001) 58129137-58160495 protein_coding
ENSMUST00000131443 (Cytip-008) 58134066-58156797 processed_transcript
ENSMUST00000144117 (Cytip-006) 58133849-58195517 processed_transcript
ENSMUST00000146545 (Cytip-007) 58147559-58160119 processed_transcript
ENSMUST00000148764 (Cytip-002) 58133934-58195527 processed_transcript
ENSMUST00000151169 (Cytip-004) 58160037-58160657 processed_transcript
ENSMUST00000151785 (Cytip-005) 58147734-58195528 processed_transcript
ENSMUST00000153052 (Cytip-003) 58159976-58195532 processed_transcript
ENSMUSG00000053472 (Gm13534)
predicted gene 13534 		ENSMUST00000121169 (Gm13534-001) 58108060-58108572 processed_pseudogene
ENSMUSG00000081642 (Gm13532)
predicted gene 13532 		ENSMUST00000120373 (Gm13532-001) 57628989-57629228 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088Y_0001ENSG00000115165ENST00000264192ENST00000418920ENST00000435117ENST00000439355ENST00000457793ENST00000462109ENST00000483929ENST00000497432ENSG00000136541ENST00000397283ENST00000409216ENST00000409395ENST00000409925ENST00000410096ENST00000411762ENST00000419116ENST00000420317ENST00000420719ENSG00000136542ENST00000259056ENST00000461704ENST00000463418ENSG00000213194ENST00000434574ENSG00000216054ENST00000401235ENSG00000222404ENST00000410472ENSG00000230562ENST00000464802CIL_00088Y_0002ENSMUSG00000026828ENSMUST00000112616ENSMUST00000144671ENSMUST00000166729ENSMUSG00000026830ENSMUST00000090940ENSMUSG00000026832ENSMUST00000028175ENSMUST00000131443ENSMUST00000144117ENSMUST00000146545ENSMUST00000148764ENSMUST00000151169ENSMUST00000151785ENSMUST00000153052ENSMUSG00000053472ENSMUST00000121169ENSMUSG00000081642ENSMUST00000120373
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00088Y_0001ENSG00000115165ENST00000264192ENST00000435117ENST00000457793ENST00000462109ENST00000483929ENSG00000136541ENST00000397283ENST00000409216ENST00000409925ENST00000410096ENST00000411762ENST00000419116ENST00000420317ENST00000420719ENSG00000136542ENST00000259056ENST00000461704ENST00000463418ENSG00000213194ENST00000434574ENSG00000216054ENST00000401235ENSG00000222404ENST00000410472ENSG00000230562ENST00000464802CIL_00088Y_0002ENSMUSG00000026828ENSMUST00000112616ENSMUST00000166729ENSMUSG00000026830ENSMUST00000090940ENSMUSG00000026832ENSMUST00000028175ENSMUST00000131443ENSMUST00000144117ENSMUST00000146545ENSMUST00000148764ENSMUST00000151785ENSMUST00000153052ENSMUSG00000053472ENSMUST00000121169ENSMUSG00000081642ENSMUST00000120373
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115165 ENST00000264192 3.309±0.00 12.233±0.00 0.650±0.00 0.314±0.00 2.341±1.28 2.138±0.78 0.665±0.25 0.582±0.30 1.698±0.69 5.699±0.88 0.383±0.00 2.080±1.61 1.381±0.17 2.104±0.78
ENST00000418920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000435117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.754±0.00 N/A N/A N/A
ENST00000439355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457793 N/A N/A N/A 0.150±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.590±0.00 N/A
ENST00000462109 N/A N/A N/A N/A N/A N/A 0.772±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000483929 N/A N/A N/A N/A N/A 4.276±0.00 N/A 5.920±0.00 N/A N/A N/A 6.020±0.00 N/A N/A
ENST00000497432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136541 ENST00000397283 N/A 0.493±0.00 N/A 5.073±0.00 N/A 0.051±0.04 0.019±0.00 N/A 0.037±0.00 0.034±0.00 N/A 0.038±0.00 0.023±0.01 0.014±0.00
ENST00000409216 N/A N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409925 N/A N/A N/A N/A 0.207±0.00 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A 0.043±0.00
ENST00000410096 N/A 0.559±0.00 N/A 24.298±3.58 N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENST00000411762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.129±0.00 N/A N/A
ENST00000419116 N/A N/A N/A N/A 0.467±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420317 N/A N/A N/A N/A N/A N/A N/A 0.071±0.00 0.478±0.00 N/A N/A 0.156±0.00 N/A 0.098±0.00
ENST00000420719 N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A 0.235±0.00 0.021±0.00 N/A
ENSG00000136542 ENST00000259056 0.026±0.00 0.011±0.00 N/A 0.023±0.00 0.635±0.54 1.625±1.28 0.050±0.01 0.074±0.00 0.160±0.16 2.868±0.82 N/A 1.145±0.93 0.057±0.00 0.069±0.05
ENST00000461704 N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000463418 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213194 ENST00000434574 0.062±0.00 0.015±0.00 N/A 0.031±0.00 N/A N/A 0.014±0.00 0.015±0.00 0.066±0.00 N/A N/A N/A N/A 0.247±0.21
ENSG00000216054 ENST00000401235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.234±0.00 N/A N/A N/A
ENSG00000222404 ENST00000410472 N/A 0.084±0.00 N/A N/A N/A N/A N/A N/A N/A 0.685±0.00 N/A N/A N/A 0.303±0.01
ENSG00000230562 ENST00000464802 N/A 0.063±0.00 N/A N/A 0.024±0.00 0.255±0.00 N/A N/A 0.050±0.00 0.209±0.00 N/A 0.037±0.01 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026828 ENSMUST00000112616 0.174±0.13 N/A 0.151±0.02 0.062±0.00 0.101±0.06 2.840±0.53 0.024±0.02 0.018±0.00 0.012±0.00 0.271±0.07 0.074±0.02 0.142±0.07 0.050±0.01 N/A
ENSMUST00000144671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166729 N/A N/A N/A N/A 0.035±0.00 N/A N/A 0.021±0.01 0.009±0.01 0.099±0.00 0.135±0.00 0.178±0.12 0.007±0.00 0.012±0.00
ENSMUSG00000026830 ENSMUST00000090940 0.012±0.00 0.131±0.07 N/A 2.723±3.42 0.042±0.03 N/A 0.019±0.00 0.021±0.01 0.029±0.03 N/A 0.008±0.00 0.104±0.02 0.040±0.00 0.046±0.04
ENSMUSG00000026832 ENSMUST00000028175 0.461±0.04 1.063±0.16 0.226±0.13 0.011±0.00 9.210±0.66 0.687±0.06 0.392±0.16 N/A 0.278±0.21 6.640±0.00 0.065±0.07 0.357±0.18 0.061±0.05 0.591±0.08
ENSMUST00000131443 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A N/A N/A 0.975±0.00 N/A N/A
ENSMUST00000144117 N/A 1.397±0.00 0.608±0.00 0.051±0.00 13.494±0.00 2.600±1.00 0.318±0.00 N/A 0.529±0.39 N/A 0.106±0.00 1.029±0.29 0.265±0.00 0.838±0.17
ENSMUST00000146545 3.524±0.56 1.892±0.00 0.963±0.09 0.058±0.02 40.294±14.72 4.507±1.86 1.496±0.93 5.086±0.71 0.760±0.57 29.937±6.21 0.044±0.00 1.894±1.07 0.325±0.10 3.326±0.47
ENSMUST00000148764 N/A 4.452±1.66 N/A 0.031±0.00 13.140±0.00 1.424±0.46 N/A 4.798±1.03 N/A 8.914±0.01 N/A 0.863±0.28 0.205±0.13 1.472±0.00
ENSMUST00000151169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151785 N/A 2.087±0.00 N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A 0.059±0.00 1.030±0.00 0.142±0.00 1.332±0.00
ENSMUST00000153052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.195±0.00 N/A N/A N/A
ENSMUSG00000053472 ENSMUST00000121169 0.139±0.02 N/A 0.047±0.00 0.159±0.13 N/A N/A 0.114±0.00 0.125±0.01 0.108±0.06 N/A 0.179±0.03 N/A 1.079±0.54 0.414±0.01
ENSMUSG00000081642 ENSMUST00000120373 1.137±0.00 N/A 0.205±0.09 0.421±0.34 N/A N/A N/A N/A 1.034±0.47 N/A 0.323±0.00 0.228±0.00 0.511±0.22 N/A

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