C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stomatin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028241 Stom-001 ENSMUSG00000026880 10090 - 2:35313986-35336976 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028241
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028241 52.018±14.41 13.531±1.37 33.427±1.00 2.510±1.33 35.205±4.63 33.278±4.52 39.616±3.71 9.220±0.34 42.509±20.72 28.368±4.73 10.315±0.57 19.400±3.84 7.789±4.16 10.831±3.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006N3 CIL_0006N3_0002 CGP 2:35279663-35336976

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IEA extracellular space
GO:0005737 IEA cytoplasm
GO:0005856 ISS cytoskeleton
GO:0005887 ISS integral component of plasma membrane
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0031982 IEA vesicle
GO:0034765 IDA regulation of ion transmembrane transport
GO:0042802 IPI identical protein binding
GO:0042803 IPI protein homodimerization activity
GO:0045121 ISS membrane raft
GO:0051260 ISS protein homooligomerization
GO:0070062 IEA extracellular vesicular exosome
GO:0072562 IEA blood microparticle
GO:1901585 IDA regulation of acid-sensing ion channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286713 STOM-001 protein_coding Homo_sapiens 0 867
ENST00000538954 STOM-201 protein_coding Homo_sapiens 0 472

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