C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028286 Agpat2-001 ENSMUSG00000026922 10090 - 2:26593057-26604332 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028286
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028286 752.333±243.67 568.178±127.09 28.532±3.37 701.010±71.80 107.204±12.31 62.922±14.70 90.263±8.37 132.644±84.49 104.798±8.17 5.819±0.00 83.136±24.89 21.541±6.14 34.404±17.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003X5 CIL_0003X5_0002 CGP 2:26457903-26593120
CIL_00035A CIL_00035A_0003 CGP 2:26593057-26636497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001819 IEA positive regulation of cytokine production
GO:0003841 IDA 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005783 IDA endoplasmic reticulum
GO:0006654 IEA phosphatidic acid biosynthetic process
GO:0008544 IEA epidermis development
GO:0008654 NAS phospholipid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016024 IEA CDP-diacylglycerol biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371694 AGPAT2-002 protein_coding Homo_sapiens 0 436
ENST00000371696 AGPAT2-001 protein_coding Homo_sapiens 0 680
ENST00000470861 AGPAT2-003 retained_intron Homo_sapiens 0 272
ENST00000538402 AGPAT2-201 protein_coding Homo_sapiens 0 680

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