C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003X5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148400-ENSG00000172889 CGP 9606 9:136494444-136672678
GeneTranscriptPositionBiotype
ENSG00000148400 (NOTCH1)
notch 1 		ENST00000277541 (NOTCH1-001) 136494444-136545862 protein_coding
ENST00000491649 (NOTCH1-003) 136522628-136523898 processed_transcript
ENST00000494783 (NOTCH1-002) 136502446-136504845 processed_transcript
ENSG00000172889 (EGFL7)
EGF-like-domain, multiple 7 		ENST00000308874 (EGFL7-201) 136662927-136672677 protein_coding
ENST00000371698 (EGFL7-003) 136665792-136672678 protein_coding
ENST00000371699 (EGFL7-001) 136658856-136672678 protein_coding
ENST00000406555 (EGFL7-002) 136662930-136672678 protein_coding
ENST00000490469 (EGFL7-004) 136662933-136669674 processed_transcript
ENST00000492002 (EGFL7-006) 136665788-136671993 processed_transcript
ENST00000492862 (EGFL7-005) 136662932-136668673 protein_coding
ENSG00000199161 (MIR126)
microRNA 126 		ENST00000362291 (MIR126-201) 136670602-136670686 miRNA
ENSG00000227512 (RP11-413M3.4)
 ENST00000439501 (RP11-413M3.4-001) 136542881-136543835 antisense
ENSG00000228401 (RP11-251M1.1)
 ENST00000411904 (RP11-251M1.1-001) 136648610-136660421 antisense
ENSG00000237886 (MIR4674HG)
MIR4674 host gene (non-protein coding) 		ENST00000429224 (MIR4674HG-001) 136546212-136549449 antisense
ENST00000450304 (MIR4674HG-002) 136549130-136549893 antisense
ENSG00000279141 (LINC01451)
long intergenic non-protein coding RNA 1451 		ENST00000623792 (LINC01451-201) 136616312-136616846 pseudogene
CIL_0003X5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026923-ENSMUSG00000026921 CGP 10090 2:26457903-26593120
GeneTranscriptPositionBiotype
ENSMUSG00000026921 (Egfl7)
EGF-like domain 7 		ENSMUST00000100290 (Egfl7-002) 26583864-26592681 protein_coding
ENSMUST00000102907 (Egfl7-003) 26583880-26592682 protein_coding
ENSMUST00000131112 (Egfl7-007) 26590965-26592676 protein_coding
ENSMUST00000139801 (Egfl7-011) 26583905-26593120 nonsense_mediated_decay
ENSMUST00000145575 (Egfl7-006) 26586672-26590939 protein_coding
ENSMUST00000147351 (Egfl7-008) 26589335-26591563 retained_intron
ENSMUST00000149460 (Egfl7-012) 26586661-26590908 processed_transcript
ENSMUST00000149789 (Egfl7-010) 26591435-26592682 protein_coding
ENSMUST00000150404 (Egfl7-014) 26588543-26592443 protein_coding
ENSMUST00000152713 (Egfl7-004) 26580014-26589384 protein_coding
ENSMUST00000152988 (Egfl7-009) 26591434-26592682 protein_coding
ENSMUST00000166920 (Egfl7-001) 26581056-26592684 protein_coding
ENSMUST00000172683 (Egfl7-019) 26592147-26592682 retained_intron
ENSMUST00000173777 (Egfl7-018) 26591446-26592290 retained_intron
ENSMUST00000173920 (Egfl7-013) 26586689-26590489 protein_coding
ENSMUST00000174211 (Egfl7-005) 26586630-26592681 protein_coding
ENSMUST00000174465 (Egfl7-017) 26592023-26592681 processed_transcript
ENSMUST00000174572 (Egfl7-015) 26590520-26590972 retained_intron
ENSMUST00000174656 (Egfl7-016) 26591029-26592682 protein_coding
ENSMUSG00000026922 (Agpat2)
1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta) 		ENSMUST00000028286 (Agpat2-001) 26593057-26604332 protein_coding
ENSMUST00000131940 (Agpat2-002) 26593057-26604211 processed_transcript
ENSMUST00000140386 (Agpat2-003) 26594503-26604417 processed_transcript
ENSMUST00000140508 (Agpat2-005) 26596118-26603716 processed_transcript
ENSMUST00000154753 (Agpat2-004) 26596441-26603926 protein_coding
ENSMUSG00000026923 (Notch1)
notch 1 		ENSMUST00000028288 (Notch1-001) 26457903-26503822 protein_coding
ENSMUST00000123873 (Notch1-010) 26468543-26469749 processed_transcript
ENSMUST00000126872 (Notch1-006) 26465471-26466654 processed_transcript
ENSMUST00000129506 (Notch1-003) 26469825-26470498 processed_transcript
ENSMUST00000131393 (Notch1-009) 26498155-26503824 retained_intron
ENSMUST00000132820 (Notch1-002) 26471276-26516663 protein_coding
ENSMUST00000132941 (Notch1-011) 26462218-26462747 processed_transcript
ENSMUST00000138034 (Notch1-008) 26465471-26466367 processed_transcript
ENSMUST00000140082 (Notch1-005) 26465471-26466794 processed_transcript
ENSMUST00000147481 (Notch1-004) 26465471-26467613 processed_transcript
ENSMUST00000148948 (Notch1-007) 26465471-26466163 processed_transcript
ENSMUSG00000082864 (Gm13358)
predicted gene 13358 		ENSMUST00000121427 (Gm13358-001) 26558625-26559193 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003X5_0001ENSG00000148400ENST00000277541ENST00000491649ENST00000494783ENSG00000172889ENST00000308874ENST00000371698ENST00000371699ENST00000406555ENST00000490469ENST00000492002ENST00000492862ENSG00000199161ENST00000362291ENSG00000227512ENST00000439501ENSG00000228401ENST00000411904ENSG00000237886ENST00000429224ENST00000450304ENSG00000279141ENST00000623792CIL_0003X5_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003X5_0001ENSG00000148400ENST00000277541ENSG00000172889ENST00000308874ENST00000371698ENST00000406555ENST00000490469ENSG00000199161ENST00000362291ENSG00000227512ENST00000439501ENSG00000228401ENST00000411904ENSG00000237886ENST00000429224ENST00000450304ENSG00000279141ENST00000623792CIL_0003X5_0002ENSMUSG00000026921ENSMUST00000100290ENSMUST00000102907ENSMUST00000145575ENSMUST00000147351ENSMUST00000150404ENSMUST00000152988ENSMUST00000172683ENSMUST00000173777ENSMUST00000174211ENSMUSG00000026922ENSMUST00000028286ENSMUST00000131940ENSMUST00000140508ENSMUSG00000026923ENSMUST00000028288ENSMUSG00000082864ENSMUST00000121427
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148400 ENST00000277541 13.060±0.00 8.362±0.00 N/A 1.949±1.32 6.834±4.08 9.612±0.00 1.780±0.86 2.422±1.21 1.876±0.40 9.403±0.00 1.040±0.34 4.527±2.95 4.290±1.85 2.389±1.24
ENST00000491649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000172889 ENST00000308874 N/A N/A N/A N/A N/A 0.324±0.00 N/A 1.132±0.00 0.510±0.00 N/A N/A N/A N/A N/A
ENST00000371698 8.332±0.00 N/A N/A 10.928±0.00 N/A 0.532±0.00 3.111±0.00 10.835±0.00 6.628±0.00 N/A 2.738±0.00 10.409±8.25 60.595±26.45 14.490±9.71
ENST00000371699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000406555 18.644±0.00 29.576±0.00 N/A 2.194±0.00 20.224±0.00 18.128±0.00 7.768±0.00 8.881±0.00 5.140±0.00 54.528±0.00 3.494±0.00 16.001±3.48 56.597±40.89 10.155±0.00
ENST00000490469 N/A N/A N/A N/A 1.178±0.00 2.879±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199161 ENST00000362291 N/A 1.108±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227512 ENST00000439501 0.057±0.00 0.477±0.00 N/A 0.042±0.00 N/A 0.285±0.19 N/A N/A N/A 0.808±0.00 N/A 0.104±0.02 0.077±0.00 0.119±0.00
ENSG00000228401 ENST00000411904 2.106±0.00 1.205±0.00 N/A 0.040±0.00 0.904±0.00 0.500±0.00 0.214±0.06 0.578±0.03 0.589±0.40 5.679±4.44 N/A 0.180±0.05 1.521±1.62 0.299±0.00
ENSG00000237886 ENST00000429224 N/A 0.499±0.00 N/A 0.127±0.00 1.116±0.00 N/A 0.049±0.00 0.691±0.00 0.148±0.04 0.269±0.00 N/A 0.755±0.32 0.294±0.04 0.323±0.06
ENST00000450304 0.058±0.00 0.618±0.00 N/A N/A 0.374±0.00 2.337±0.00 N/A 2.050±0.00 0.107±0.00 0.113±0.00 0.052±0.00 N/A 0.199±0.00 0.378±0.09
ENSG00000279141 ENST00000623792 N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A 0.115±0.00 0.129±0.00 N/A N/A N/A 0.166±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026921 ENSMUST00000100290 N/A N/A N/A 16.934±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 17.917±6.19 N/A
ENSMUST00000102907 N/A N/A 27.032±1.82 28.466±2.22 N/A 33.273±0.00 74.731±13.55 61.498±2.80 22.956±6.43 384.605±117.56 19.498±3.92 85.472±14.63 19.036±1.53 N/A
ENSMUST00000131112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139801 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145575 N/A N/A N/A N/A N/A N/A N/A N/A N/A 383.483±0.00 N/A N/A N/A N/A
ENSMUST00000147351 N/A N/A N/A 16.053±0.00 N/A N/A N/A N/A N/A N/A N/A 21.264±0.00 18.989±3.15 N/A
ENSMUST00000149460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.444±0.00 22.349±0.00 N/A
ENSMUST00000152713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152988 N/A N/A 35.019±0.00 N/A N/A N/A N/A N/A N/A 423.097±105.31 15.294±0.00 N/A N/A N/A
ENSMUST00000166920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.645±1.59 43.856±0.00 N/A N/A
ENSMUST00000173777 N/A N/A 33.251±4.28 N/A N/A N/A 51.383±0.00 N/A N/A N/A 18.719±3.89 20.349±7.17 N/A N/A
ENSMUST00000173920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174211 N/A N/A N/A N/A N/A N/A N/A N/A 27.641±3.72 N/A N/A N/A N/A N/A
ENSMUST00000174465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026922 ENSMUST00000028286 752.333±243.67 568.178±127.09 28.532±3.37 N/A 701.010±71.80 107.204±12.31 62.922±14.70 90.263±8.37 132.644±84.49 104.798±8.17 5.819±0.00 83.136±24.89 21.541±6.14 34.404±17.68
ENSMUST00000131940 N/A N/A N/A N/A 429.963±0.00 N/A N/A N/A N/A N/A N/A 75.929±39.31 29.550±4.63 37.005±11.47
ENSMUST00000140386 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.871±0.00
ENSMUST00000154753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026923 ENSMUST00000028288 14.829±1.16 8.736±0.66 8.603±1.08 18.817±17.89 19.126±8.24 9.506±1.44 7.047±0.93 6.078±0.55 2.070±0.85 36.942±11.56 1.534±0.31 12.041±4.48 1.662±0.57 1.472±0.14
ENSMUST00000123873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082864 ENSMUST00000121427 N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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