C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: xin actin-binding repeat containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028410 Xirp2-201 ENSMUSG00000027022 10090 + 2:67446002-67526606 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungTestisENSMUST00000028410
Transcript ID Adipose Bladder Brain Kidney Liver Lung Testis
ENSMUST00000028410 0.002±0.00 0.000±0.00 0.007±0.01 0.002±0.00 0.001±0.00 0.038±0.00 0.004±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003281 IMP ventricular septum development
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0008270 IEA zinc ion binding
GO:0030018 IDA Z disc
GO:0030036 IEA actin cytoskeleton organization
GO:0030054 IEA cell junction
GO:0045216 IMP cell-cell junction organization
GO:0051393 IDA alpha-actinin binding
GO:0055008 IMP cardiac muscle tissue morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295237 XIRP2-201 protein_coding Homo_sapiens 0 2150
ENST00000409043 XIRP2-002 protein_coding Homo_sapiens 0 769
ENST00000409195 XIRP2-001 protein_coding Homo_sapiens 0 5151
ENST00000409273 XIRP2-005 protein_coding Homo_sapiens 0 5151
ENST00000409605 XIRP2-007 protein_coding Homo_sapiens 0 769
ENST00000409728 XIRP2-006 protein_coding Homo_sapiens 0 769

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