C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ER membrane protein complex subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028551 Emc4-001 ENSMUSG00000027131 10090 - 2:112363011-112368027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028551 63.119±8.14 63.229±3.75 57.179±4.89 43.450±1.61 58.156±10.96 40.687±6.96 43.325±6.02 59.954±1.84 37.930±7.75 57.150±4.73 49.164±7.18 65.207±4.91 56.843±23.22 64.835±2.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZB CIL_0000ZB_0002 CGP 2:112265825-112406319
CIL_0003TQ CIL_0003TQ_0002 CGP 2:112266314-112406319

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0006915 IEA apoptotic process
GO:0008150 ND biological_process
GO:0016021 ISS integral component of membrane
GO:0072546 ISS ER membrane protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249209 EMC4-003 protein_coding Homo_sapiens 0 553
ENST00000267750 EMC4-001 protein_coding Homo_sapiens 0 824
ENST00000557879 EMC4-011 protein_coding Homo_sapiens 0 302
ENST00000557941 EMC4-005 retained_intron Homo_sapiens 0 302
ENST00000558102 EMC4-009 nonsense_mediated_decay Homo_sapiens 0 255
ENST00000558205 EMC4-002 nonsense_mediated_decay Homo_sapiens 0 787
ENST00000558810 EMC4-010 retained_intron Homo_sapiens 0 490
ENST00000559078 EMC4-013 protein_coding Homo_sapiens 0 466
ENST00000559421 EMC4-012 protein_coding Homo_sapiens 0 302
ENST00000560911 EMC4-007 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000560947 EMC4-014 protein_coding Homo_sapiens 0 468
ENST00000561246 EMC4-006 retained_intron Homo_sapiens 0 224
ENST00000561372 EMC4-008 protein_coding Homo_sapiens 0 455

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