C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003TQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078892-ENSDARG00000039268 CGP 7955 7:1632569-1648973
GeneTranscriptPositionBiotype
ENSDARG00000039268 (emc4)
ER membrane protein complex subunit 4 		ENSDART00000057378 (emc4-201) 1648460-1648973 protein_coding
ENSDARG00000078892 (SLC12A6 (1 of 2))
solute carrier family 12 (potassium/chloride transporter), member 6 		ENSDART00000108622 (SLC12A6 (1 of 2)-201) 1632569-1639923 protein_coding
CIL_0003TQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000096764-ENSMUSG00000096764 CGP 10090 2:112266314-112406319
GeneTranscriptPositionBiotype
ENSMUSG00000027130 (Slc12a6)
solute carrier family 12, member 6 		ENSMUST00000028549 (Slc12a6-001) 112266819-112363156 protein_coding
ENSMUST00000053666 (Slc12a6-004) 112284577-112363156 protein_coding
ENSMUST00000110987 (Slc12a6-005) 112266742-112356029 protein_coding
ENSMUST00000110991 (Slc12a6-003) 112265825-112359127 protein_coding
ENSMUST00000132752 (Slc12a6-007) 112352526-112354238 processed_transcript
ENSMUST00000133840 (Slc12a6-008) 112346995-112351633 processed_transcript
ENSMUST00000137896 (Slc12a6-006) 112356195-112363163 retained_intron
ENSMUST00000156470 (Slc12a6-009) 112354202-112356887 processed_transcript
ENSMUSG00000027131 (Emc4)
ER membrane protein complex subunit 4 		ENSMUST00000028551 (Emc4-001) 112363011-112368027 protein_coding
ENSMUST00000153967 (Emc4-002) 112363793-112368020 processed_transcript
ENSMUSG00000027132 (Katnbl1)
katanin p80 subunit B like 1 		ENSMUST00000028552 (Katnbl1-001) 112379211-112414240 protein_coding
ENSMUST00000151257 (Katnbl1-002) 112379226-112407518 retained_intron
ENSMUSG00000081541 (Gm13940)
predicted gene 13940 		ENSMUST00000121023 (Gm13940-001) 112389197-112389497 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TQ_0001ENSDARG00000039268ENSDART00000057378ENSDARG00000078892ENSDART00000108622CIL_0003TQ_0002ENSMUSG00000027130ENSMUST00000028549ENSMUST00000053666ENSMUST00000110987ENSMUST00000110991ENSMUST00000132752ENSMUST00000133840ENSMUST00000137896ENSMUST00000156470ENSMUSG00000027131ENSMUST00000028551ENSMUST00000153967ENSMUSG00000027132ENSMUST00000028552ENSMUST00000151257ENSMUSG00000081541ENSMUST00000121023
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003TQ_0001ENSDARG00000039268ENSDART00000057378ENSDARG00000078892ENSDART00000108622CIL_0003TQ_0002ENSMUSG00000027130ENSMUST00000028549ENSMUST00000053666ENSMUST00000110991ENSMUST00000137896ENSMUSG00000027131ENSMUST00000028551ENSMUSG00000027132ENSMUST00000028552ENSMUSG00000081541ENSMUST00000121023
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039268 ENSDART00000057378 N/A N/A N/A 1.661±0.00 N/A N/A 0.320±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078892 ENSDART00000108622 N/A N/A N/A 8.041±6.91 N/A N/A 1.032±0.44 0.422±0.00 0.845±0.00 N/A 2.354±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027130 ENSMUST00000028549 6.081±0.62 5.180±0.62 N/A 6.235±1.49 9.848±4.76 4.909±0.00 4.364±1.81 4.427±0.58 1.945±0.41 5.775±0.97 3.139±1.14 6.876±1.58 3.110±1.07 3.857±2.14
ENSMUST00000053666 N/A N/A 19.934±2.78 N/A N/A 5.910±1.02 N/A 5.839±1.41 2.727±0.85 5.343±0.07 N/A 3.818±0.00 3.320±0.74 0.784±0.00
ENSMUST00000110987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110991 6.991±1.03 2.914±0.00 N/A 6.468±0.23 9.000±2.68 4.096±0.79 2.520±0.00 4.606±0.33 2.400±0.31 12.944±0.59 N/A 11.285±2.96 N/A 4.701±2.43
ENSMUST00000132752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137896 N/A N/A 12.178±0.44 5.706±1.09 9.927±0.26 N/A N/A N/A 3.268±0.50 7.025±0.42 N/A 4.401±1.49 N/A 0.888±0.00
ENSMUST00000156470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027131 ENSMUST00000028551 63.119±8.14 63.229±3.75 57.179±4.89 43.450±1.61 58.156±10.96 40.687±6.96 43.325±6.02 59.954±1.84 37.930±7.75 57.150±4.73 49.164±7.18 65.207±4.91 56.843±23.22 64.835±2.83
ENSMUST00000153967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000027132 ENSMUST00000028552 N/A N/A N/A 8.791±0.97 N/A N/A N/A N/A 6.873±1.81 N/A N/A 5.044±1.51 10.743±2.80 N/A
ENSMUST00000151257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081541 ENSMUST00000121023 0.406±0.13 N/A 0.237±0.11 1.102±0.00 0.308±0.00 0.555±0.00 N/A 0.307±0.00 0.080±0.00 1.005±0.18 N/A 1.710±0.00 0.416±0.08 0.559±0.00

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