C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: katanin p80 subunit B like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028552 Katnbl1-001 ENSMUSG00000027132 10090 + 2:112379211-112414240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaENSMUST00000028552
Transcript ID Brain Liver Ovary Placenta
ENSMUST00000028552 8.791±0.97 6.873±1.81 5.044±1.51 10.743±2.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ZB CIL_0000ZB_0002 CGP 2:112265825-112406319
CIL_0003TQ CIL_0003TQ_0002 CGP 2:112266314-112406319
CIL_0000Z9 CIL_0000Z9_0002 CGP 2:112379211-112472162

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256544 KATNBL1-001 protein_coding Homo_sapiens 0 2073
ENST00000433311 KATNBL1P2-001 processed_pseudogene Homo_sapiens 0 436
ENST00000443475 KATNBL1P3-001 processed_pseudogene Homo_sapiens 0 390
ENST00000453433 KATNBL1P6-001 transcribed_processed_pseudogene Homo_sapiens 0 998
ENST00000503545 KATNBL1P4-001 processed_pseudogene Homo_sapiens 0 595
ENST00000540594 KATNBL1-003 retained_intron Homo_sapiens 0 704
ENST00000557877 KATNBL1-017 protein_coding Homo_sapiens 0 577
ENST00000558473 KATNBL1-010 retained_intron Homo_sapiens 0 532
ENST00000558681 KATNBL1-013 retained_intron Homo_sapiens 0 375
ENST00000559462 KATNBL1-005 protein_coding Homo_sapiens 0 499
ENST00000559515 KATNBL1-006 protein_coding Homo_sapiens 0 191
ENST00000559760 KATNBL1-014 protein_coding Homo_sapiens 0 595
ENST00000560108 KATNBL1-007 protein_coding Homo_sapiens 0 568
ENST00000560247 KATNBL1-002 retained_intron Homo_sapiens 0 348
ENST00000560308 KATNBL1-009 retained_intron Homo_sapiens 0 701
ENST00000560310 KATNBL1-008 protein_coding Homo_sapiens 0 669
ENST00000560671 KATNBL1-004 retained_intron Homo_sapiens 0 676
ENST00000561270 KATNBL1-011 protein_coding Homo_sapiens 0 453
ENST00000561371 KATNBL1-012 protein_coding Homo_sapiens 0 268
ENST00000562413 KATNBL1P6-002 processed_transcript Homo_sapiens 0 1339

Loading