C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lin-7 homolog C (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028583 Lin7c-001 ENSMUSG00000027162 10090 + 2:109890853-109901003 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028583
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028583 5.139±0.85 10.557±3.32 11.153±0.21 20.070±8.37 6.203±1.39 14.151±2.13 3.821±0.74 9.751±1.05 6.283±1.11 12.875±0.59 3.890±0.66 11.603±2.47 13.456±4.39 3.353±0.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002011 IEA morphogenesis of an epithelial sheet
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005911 IEA cell-cell junction
GO:0005923 IEA tight junction
GO:0006887 IEA exocytosis
GO:0007269 IGI neurotransmitter secretion
GO:0008092 IEA cytoskeletal protein binding
GO:0015031 IEA protein transport
GO:0019904 IEA protein domain specific binding
GO:0030165 IEA PDZ domain binding
GO:0043005 IEA neuron projection
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0070062 IEA extracellular vesicular exosome
GO:0097016 IEA L27 domain binding
GO:0097025 IEA MPP7-DLG1-LIN7 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000139644 lin7b-001 protein_coding Danio_rerio 0 283
ENST00000278193 LIN7C-002 protein_coding Homo_sapiens 0 1315
ENST00000524596 LIN7C-001 protein_coding Homo_sapiens 0 1031

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