C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: McKusick-Kaufman syndrome
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028730 Mkks-002 ENSMUSG00000027274 10090 - 2:136873780-136891382 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastMuscleOvaryENSMUST00000028730
Transcript ID Adrenal Breast Muscle Ovary
ENSMUST00000028730 0.509±0.00 2.527±0.00 1.955±0.50 1.113±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043K CIL_00043K_0002 CGP 2:136713453-136891389
CIL_000360 CIL_000360_0002 CGP 2:136873780-137071950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006457 IEA protein folding
GO:0007286 IMP spermatid development
GO:0007608 IMP sensory perception of smell
GO:0010629 IMP negative regulation of gene expression
GO:0014824 IMP artery smooth muscle contraction
GO:0021756 IMP striatum development
GO:0021766 IMP hippocampus development
GO:0021987 IMP cerebral cortex development
GO:0031514 IMP motile cilium
GO:0033210 IMP leptin-mediated signaling pathway
GO:0035058 IGI nonmotile primary cilium assembly
GO:0035176 IMP social behavior
GO:0038108 IMP negative regulation of appetite by leptin-mediated signaling pathway
GO:0040018 IMP positive regulation of multicellular organism growth
GO:0042311 IMP vasodilation
GO:0042384 IMP cilium assembly
GO:0044321 IMP response to leptin
GO:0045444 IEP fat cell differentiation
GO:0045494 IMP photoreceptor cell maintenance
GO:0045776 IMP negative regulation of blood pressure
GO:0048854 IMP brain morphogenesis
GO:0050910 IMP detection of mechanical stimulus involved in sensory perception of sound
GO:0051082 IEA unfolded protein binding
GO:0051131 IMP chaperone-mediated protein complex assembly
GO:0051216 IMP cartilage development
GO:0060271 IMP cilium morphogenesis
GO:0060296 IMP regulation of cilium beat frequency involved in ciliary motility

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347364 MKKS-001 protein_coding Homo_sapiens 0 1908
ENST00000399054 MKKS-002 protein_coding Homo_sapiens 0 1908
ENST00000609375 MKKS-003 protein_coding Homo_sapiens 0 383

Loading