C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000028852 Mrps5-001 ENSMUSG00000027374 10090 + 2:127587222-127606829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028852
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028852 3.091±0.88 3.408±0.49 3.686±0.13 4.809±2.47 3.089±0.43 2.522±0.51 1.944±0.20 3.927±0.47 2.883±0.78 2.484±0.38 2.274±0.49 4.503±1.37 2.481±0.82 1.106±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272418 MRPS5-001 protein_coding Homo_sapiens 0 1050
ENST00000345084 MRPS5-002 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000461916 MRPS5-007 retained_intron Homo_sapiens 0 514
ENST00000482568 MRPS5-008 retained_intron Homo_sapiens 0 468
ENST00000482821 MRPS5-004 retained_intron Homo_sapiens 0 353

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